Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00084 ATGGCGCCGCAACAGAGAAAACCGAGAGTTAGCAGAAACCCAGAATTGATAAGGGGAATTGGAAAGTATTCGAGGTCGAAGATGTACCACAAGAGGGGCATCTGGGCTATCAAGGCCAAAAACGGCGGCGTTTTCCCTCGCCATGATACCAAATCTAAACCTGAAGCTCCCGCTGAAAAAACCCCCAAATTTTACCCCGCTGATGATGTCAAGAAGCCTCTTCTTAACAAGCACAAGCCCAAACCTACTAAGCTCAGGGCTAGCATTACTCCTGGGACAGTGCTGATTCTTCTTGCTGGTAGATTTAAGGGAAAGAGGGTAGTGTTTCTGAAGCAGCTTCCTTCTGGGTTGCTTCTTGTAACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGTGTGAATCAGTCTTATGTTATTGGCACATCAACCAAAGTAGATGTCTCTGCTGTTAATGTGGATAAATTTGATGACAAGTACTTTGCAAAGGAAGCCCAGAAAAAGAAGAAGAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAACATGTGTTGCCCCAGGAGAAGAAAGATGACCAGAAAACAGTGGACTCTGCGTTGATAAAAGCCATTGAGGGTGTTCCTGATTTGAAGACTTATCTGGGTGCTAGGTTTTCCCTGAAGGCAGGCATGAAGCCACATGAACTAGTCTTCTAG 702 0.4558 MAPQQRKPRVSRNPELIRGIGKYSRSKMYHKRGIWAIKAKNGGVFPRHDTKSKPEAPAEKTPKFYPADDVKKPLLNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFAKEAQKKKKKGEGEFFEAEKEEKHVLPQEKKDDQKTVDSALIKAIEGVPDLKTYLGARFSLKAGMKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00084 233 SUPERFAMILY Translation proteins SH3-like domain 87 173 IPR008991 -
Gabi606g00084 233 CDD KOW_RPL6 81 233 IPR041997 -
Gabi606g00084 233 MobiDBLite consensus disorder prediction 45 76 - -
Gabi606g00084 233 Coils Coil 162 182 - -
Gabi606g00084 233 Gene3D - 87 171 IPR014722 -
Gabi606g00084 233 FunFam 60S ribosomal protein L6 87 171 - -
Gabi606g00084 233 Pfam Ribosomal protein L6, N-terminal domain 3 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Gabi606g00084 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gabi606g00084 233 MobiDBLite consensus disorder prediction 45 85 - -
Gabi606g00084 233 PANTHER 60S RIBOSOMAL PROTEIN L6 6 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00084 Gabi-Chr606 773700 775488 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00084 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 82.403 8.55e-126 354