Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00078 ATGGACTACTATTTTGTAAACCCACATTCTAACCCAAACTATGCTCGCTCTGCTGACATAGCTCCATCCTCCTCTGAGTTTCTACTTTCTGATTATCTCATTCTCGATGATTGTGCTGATCAACATCAAGAGTACTCTCGATCACAAAGTACTGATTCGTCAGAGAAGGTAACCTTCAGCGATGCCAGTCACGGATTCAATGGTGCAACCTCCAACAACAATAACATAAAATCCAAAAATGGGATCAAGCGAAATAAGGCAGAAGTGAATCCAAGGATCGCGTTTAGAACAAGATCAGAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCCGTGAAGAACAACCCCAATCTAAGGAACTACTACAAATGTTCAAGTGGAGGATGCAATGTGAAGAAAAGGGTTGAAAGGGATAGGGATGACTCGAGCTATGTGATAACAACTTATGAAGGTGTGCACAATCACGAAAGCCCATTTACCTCTTATTACAACCAAATCTCCTATGTTGATTCTAATGTTTAG 540 0.4056 MDYYFVNPHSNPNYARSADIAPSSSEFLLSDYLILDDCADQHQEYSRSQSTDSSEKVTFSDASHGFNGATSNNNNIKSKNGIKRNKAEVNPRIAFRTRSELEIMDDGYKWRKYGKKSVKNNPNLRNYYKCSSGGCNVKKRVERDRDDSSYVITTYEGVHNHESPFTSYYNQISYVDSNV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00078 179 FunFam WRKY transcription factor 57 90 164 - -
Gabi606g00078 179 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi606g00078 179 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi606g00078 179 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 166 IPR044810 GO:0003700
Gabi606g00078 179 MobiDBLite consensus disorder prediction 44 81 - -
Gabi606g00078 179 Gene3D WRKY domain 88 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi606g00078 179 SUPERFAMILY WRKY DNA-binding domain 96 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi606g00078 179 MobiDBLite consensus disorder prediction 44 80 - -
Gabi606g00078 179 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00078 Gabi-Chr606 738343 741438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00078 43 172 WRKY Transcription Factor Family AT5G64810 58.333 5.25e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi606g00078 WRKY 1.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00078 - - gmx:100500248 256.529