Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00068 ATGGGTCCCTTTACAATTTCCGTTATGGTTCAAGACTCTTCCATTTCATCACAAGATACTAAGAGAAAACATAATTCACTTCTGAGAAATTCATTTGCATCAGTTAGCATGGGAGAGGTCCGAGAGGAAAAGCCCTTTGACTTCTTACGCACTCTATTTGAGGGTGTTATTGCGGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACTATAAAAACACGTCTGCAGGCTGCTCGTGGAGGAGAAAAACTAATATTAAAAGGCCTTTATTCTGGATTGGCTGGGAACCTTGCTGGTGTCTTACCGGCGTCCGCTCTCTTTGTTGGAGTTTATGAACCTATAAAACAGAAATTGCTGAGGATATTTCCTGAAAATCTGAGTGCTTTTGCTCATTTGACTGCAGGTGCCATAGGGGGCATTGCTGCTTCACTGATTCGTGTTCCAACAGAGGTTGTTAAGCAACGAATGCAAACTGGACAGTTTACCTCAGCTTCTGGTGCTGTTTGCTTTATTGCTTCTAAGGAGGGTTTTAAAGGACTTTATGCTGGGTATGGATCTTTTTTATTGCGGGATTTACCCTTTGATGCTATTCAGTTTTGCATCTATGAGCAGATTCGAATTGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCAGAAAATGCACTTATCGGTGCTTTTGCGGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTCATCAAGACAAGGTTAATGGTTCAGGGATCTGCAAACCAATATAAGGGAATCGTAGATTGTGTTCAAACCATTATTAAGGAAGAGGGACCTGGTGCCTTTTTGAAGGGTGCTGGGCCTAGAGTACTATGGATAGGAATAGGTGGTTCAATATTTTTTGGCGTCCTTGAGGGTACAAAACGTTTTCTTGCTGAGAGGCGTCCTACCCAAGCTCAGTATACAAACTCAGACAAACGTAAAGATTAA 984 0.4248 MGPFTISVMVQDSSISSQDTKRKHNSLLRNSFASVSMGEVREEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSAFAHLTAGAIGGIAASLIRVPTEVVKQRMQTGQFTSASGAVCFIASKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENALIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIVDCVQTIIKEEGPGAFLKGAGPRVLWIGIGGSIFFGVLEGTKRFLAERRPTQAQYTNSDKRKD 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00068 327 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 54 321 - -
Gabi606g00068 327 Gene3D Mitochondrial carrier domain 44 325 IPR023395 -
Gabi606g00068 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 226 308 IPR018108 -
Gabi606g00068 327 Pfam Mitochondrial carrier protein 131 212 IPR018108 -
Gabi606g00068 327 Pfam Mitochondrial carrier protein 226 311 IPR018108 -
Gabi606g00068 327 Pfam Mitochondrial carrier protein 52 86 IPR018108 -
Gabi606g00068 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 50 122 IPR018108 -
Gabi606g00068 327 SUPERFAMILY Mitochondrial carrier 53 303 IPR023395 -
Gabi606g00068 327 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 21 319 - -
Gabi606g00068 327 PRINTS Mitochondrial carrier protein signature 68 82 IPR002067 GO:0055085
Gabi606g00068 327 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Gabi606g00068 327 PRINTS Mitochondrial carrier protein signature 55 68 IPR002067 GO:0055085
Gabi606g00068 327 PRINTS Mitochondrial carrier protein signature 231 253 IPR002067 GO:0055085
Gabi606g00068 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 131 213 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00068 Gabi-Chr606 674215 681828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00068 129 314 Chloroplast and Mitochondria Gene Families AT1G07030 30.890 8.58e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00068 K15111 - gmx:100811130 548.895