Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00062 ATGTCAACCACTTCTCTTGTTAACCACAGTTTGTTTGAGGAACAGGATCAGATGCCTATGCAGATGGGGTTCCTTCCTTTCCCATCAAACCTGACTCTCCCTCCTTTGGTTTGTCATAATCAATCTTTGAAAGCTTTCAGTTCCATAGCTCCTTCACTTGCATCTGAAGCAGATTCTGCATCAAATCTAACAGAAACCCTATTTGCAACCTCTGCTCAAAAGTCAAGAGAAGACTTTTCTTCTAGCTTTGGAGGAGCTCAATTCCTATCCTTACACAGATCCAGTGTAAATCCATGGGCATTAGGAGAAGTAACTGATTGCTTTAGCAATAAAAGAAGTGGAGAAGATCATGATCATCATCTTGGGATTTCTGCCATGAAGATGAAGAAAATCAAGGCAAGAAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAGAAAGTAGTAAAGAACACGCAGCACCCCAGAAGCTACTACCGTTGCACACAAGATAATTGTCGCGTAAAGAAACGCGTGGAGCGTTTGGCCGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTACACTCTCCATCAAATGATCTTGAAGACTCTCAATCTCCATCTCAACTTTGCAATTTCTTTTGGTAG 693 0.4271 MSTTSLVNHSLFEEQDQMPMQMGFLPFPSNLTLPPLVCHNQSLKAFSSIAPSLASEADSASNLTETLFATSAQKSREDFSSSFGGAQFLSLHRSSVNPWALGEVTDCFSNKRSGEDHDHHLGISAMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQSPSQLCNFFW 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00062 230 ProSiteProfiles WRKY domain profile. 148 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi606g00062 230 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi606g00062 230 Gene3D WRKY domain 140 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi606g00062 230 Pfam WRKY DNA -binding domain 154 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi606g00062 230 FunFam WRKY transcription factor 57 139 213 - -
Gabi606g00062 230 SUPERFAMILY WRKY DNA-binding domain 145 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi606g00062 230 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 213 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00062 Gabi-Chr606 601300 603315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00062 117 230 WRKY Transcription Factor Family AT4G39410 77.419 1.93e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi606g00062 WRKY 9.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00062 - - pvu:PHAVU_002G266400g 382.489