Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00037 ATGGCAAAGTCCCCTGAAACTGAACTCCCACTCAAAGCTTTTGGTTGGGCTGCAAAAGACACTTCTGGCTTACTTTCCCCTTTTCATTTCTCCCGAAGGGAGAATGGCGATGATGATGTCACTCTTAAAATTCTTTTTTGTGGGGTTTGCCATTCTGATCTTCACACTGTCAAGAACGATTGGGGTTTCACAACTTACCCTGTTGTTCCCGGGCATGAAATTGTTGGTGTTGTAACAAAAACCGGAAATAATGTGCAAAAATTTAAAGTGGGGGATAAAGTTGGAGTTGGTGTAATAGTGGAATCTTGTCAGGAATGTGAGAATTGCCAGCAGGATCTGGAGAGTTACTGCCCTCGACCTGTCTTTACCTATAACTCTCCTTATAAGGGGACACGAACCCATGGTGGCTTTTCTGATTTCGTGGTTGTTCACCAGCGGTATGTGCTCCTATTTCCCAACAACTTACCACTTGATGCTGGTGCTCCACTGCTATGTGCTGGGATTACCGTGTATAGCCCAATGCAATATTATGGGATGACAGAGCCAGGTAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGTCATGTTGCAATCAAATTTGGTAAAGCATTTGGGCTGAAAGTTACTGTCATTAGTAGCTCTCCCAACAAGGAAGCCGAGGCCATTGACAAACTTGGGGCTGATTCTTTCCTTGTTTCCTCTGACCCTGTAAAAATGAAGACAGCTATGGGAACTATGGACTATATCATAGACACAATATCTGCTGTTCATTCCCTGGTTCCACTGCTTGGTCTCCTGAAGCTGAATGGGAAGCTGGTCACTGTGGGATTGCCTACCAAGCCCCTCGAGCTGCCTGTCTTTCCGCTAGTTGCAGGTAAACCATCAATAATCCAATATGGACGGAAGCTTATAGGGGGGAGCAACTTTGGAGGGATTAAGGAGACTCAGGAGATGCTTGATTTCTGCGGAAAACACAACATAACTGCAGATATTGAACTGATTAGGATCGATCAAATCAACACAGCCATGGAAAGACTTGGCAAATCTGATGTGAGATATCGCTTCGTGATTGATGTGGCCAACTCCTTCTCAAGTTTGTAG 1104 0.4511 MAKSPETELPLKAFGWAAKDTSGLLSPFHFSRRENGDDDVTLKILFCGVCHSDLHTVKNDWGFTTYPVVPGHEIVGVVTKTGNNVQKFKVGDKVGVGVIVESCQECENCQQDLESYCPRPVFTYNSPYKGTRTHGGFSDFVVVHQRYVLLFPNNLPLDAGAPLLCAGITVYSPMQYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKEAEAIDKLGADSFLVSSDPVKMKTAMGTMDYIIDTISAVHSLVPLLGLLKLNGKLVTVGLPTKPLELPVFPLVAGKPSIIQYGRKLIGGSNFGGIKETQEMLDFCGKHNITADIELIRIDQINTAMERLGKSDVRYRFVIDVANSFSSL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00037 367 SMART PKS_ER_names_mod 23 358 IPR020843 GO:0016491
Gabi606g00037 367 Gene3D - 166 330 - -
Gabi606g00037 367 SUPERFAMILY GroES-like 22 184 IPR011032 -
Gabi606g00037 367 CDD CAD1 14 359 IPR047109 GO:0016616
Gabi606g00037 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Gabi606g00037 367 FunFam Cinnamyl alcohol dehydrogenase 166 330 - -
Gabi606g00037 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 328 IPR036291 -
Gabi606g00037 367 PANTHER ALDEHYDE REDUCTASE 5 363 IPR047109 GO:0016616
Gabi606g00037 367 Gene3D - 16 360 - -
Gabi606g00037 367 Pfam Alcohol dehydrogenase GroES-like domain 38 149 IPR013154 -
Gabi606g00037 367 Pfam Zinc-binding dehydrogenase 193 322 IPR013149 -
Gabi606g00037 367 FunFam Putative cinnamyl alcohol dehydrogenase 6 331 360 - -
Gabi606g00037 367 FunFam probable cinnamyl alcohol dehydrogenase 16 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00037 Gabi-Chr606 372924 376628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00037 12 364 Monolignol Biosynthesis Gene Families AT2G21730 69.382 0.0 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00037 K00083 - gmx:100819684 614.764