Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00025 ATGGCTGCCATGAACTCCACTGTCTTGGCTTGTAGCTATGCTAGATCTGTTGAAGGATGTTACGACCTCAATGCAAAGCTCACTTCCATGGCTTCAGTTGCATCACCACCACCTGTCTCTGGTCACAAGTTGCATATGATAAAAGCCCAGCAAGCCAGAGTTCCCCAATACAAAGAATCAAAAGCAAACGAAGGAAGGAGAAATGCCCTTGTTTACTTGGCAGGTACCCTTTTCACCGCTGCAGCTGCTGCTTCAAATTCTAATGCCAATGCTGGGGTCATTGAAGAATACCTTGAAAAAAGCAAGGCCAACAAGGAACTGAATGACAAGAAGAGGTTAGCTACAAGTGGGGCAAATTTCGCGAGAGCATACACTGTGCAATTTGGCACTTGCAAGTTCCCTGAGAACTTCACTGGTTGTCAAGATTTAGCCAAGCAAAAGAAAGTGCCATTTATTTCTGATGATTTGGAGCTTGAATGCGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 531 0.4407 MAAMNSTVLACSYARSVEGCYDLNAKLTSMASVASPPPVSGHKLHMIKAQQARVPQYKESKANEGRRNALVYLAGTLFTAAAAASNSNANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00025 176 FunFam Photosystem I reaction center subunit N 92 176 - -
Gabi606g00025 176 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 45 176 IPR008796 GO:0009522|GO:0015979
Gabi606g00025 176 Gene3D - 92 176 IPR044907 -
Gabi606g00025 176 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 176 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00025 Gabi-Chr606 268876 269903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00025 1 147 Calmodulin-binding Proteins AT5G64040 61.224 1.24e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00025 K02701 - cave:132166062 273.092