Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi606g00007 ATGGCTTCTTTCCCCTCTCTCTCCTTCCTCTCTCTCTTCCTCTTCCTCACCCTCTCCTCCGCCAACCGCCGCCACCATTCCCCTTCCCCAAAGCCGCCCTCCCACCCCACCACCACCGCCACGCCGGAGATCCAGCAAGCCTGCAAGGCAACCCGCTTCCCCCAGCAATGCGAATCCTCTCTGACCGATTCCACCCACCTCCCTCCCAACCCCACCCCCATCCAACTCCTCCAATCCGCCATCGCCGTCCCCTCCAACAACCTCGTCACCGCCCAATCCATGGTCAAGTCAATCCTCGACTCCTCCGCCTCAAGCCGCAACCGCACCGTCGCCGCCACCACCTGCATCGAGGTCCTCACCAACTCCCAGCACCGCATTTCCCTCGCCAACGACGCCCTGCCACGTGGCAGGACCAAGGACGCCCGTGCGTGGCTGAGCGCCGCCCTCGCCTACCAGTACGATTGCCGGAACGGCCTCATGTACGCCAACGACACCCGCGCCGTCGGCGAAACGATGACGTTCCTCGACTCCCTCGCCGTTCTCTCCAGCAACGCGCTCAGCATGGCGTTCTCCTACGACGTCTTCGGAAACGACACCGCCTCGTGGAAACCCCCGCAGACGGAGCGGGACGGGTTCTGGGAAAACTCCGAGTCGGCAACCGGTTCGGGACCCAATTCCGCCGGAGGGATCCCGACGAAGTCGGCGCCGGACGTTACGGTGTGCAAGGGAGGAGGAAACGGATGTTACAAGACGGTGCAGGAGGCGGTTAACGCGGCGCCAGATAACGACGGTGGAGCAGCGAAGAGGTTCGTGATATACATAAAAGAAGGAGTTTATGAAGAAACCGTTAGGGTTCCGTTAGAAAAGAGAAATGTAGTGTTCTTAGGTGACGGAATGGGAAAAACGGTCATCACCGGGTCGGCAAACGTGGGCCAACCCGGAATGTCAACCTACAATTCTGCCACAGTTGCGGTTCTTGGTGATGGATTCATGGCTAAGGATCTCACAATTGAAAACAGAGCAGGTCCTGATGTGCACCAAGCTGTGGCTTTTAGATCAGACAGTGATCTATCTGTGATTGAGAATTGTGAATTCTTAGGGAATCAAGATACTCTTTATGCTCATTCACTACGCCAATTTTACAAATCATGCCGAATTGTGGGGAATGTGGATTTCATCTTTGGGAACTCTGCTACAATTTTTCAAGATTGTCAAATTATGGTTCGTCCCAGACAAGTGAAACCAGAGAAGGGAGAGAACAATGCCATAACGGCGCATGGCAGGACTGACCCTGCACAGGCTACGGGCTTTGTTTTCCAGAATTGCTTGATTAATGGCACTGAGGATTATATGGCTTTGTATCGAAGCAAGCCTCAGGTGCACAAGAACTACTTGGGTAGGCCATGGAAGGAGTATTCTAGAACAGTTTTCATTCATTCAATATTGGAAGCACTTGTCACACCTCAGGGTTGGATGCCATGGAGTGGTGATTTTGCGCTCAAGACACTTTATTATGGGGAATTTGAGAATTCGGGACCTGGTTCTGATTTGTCTCAGAGGGTACCATGGAGTAGCAAGATCCCCGCTGACCATGTGCTCGCCTATTCAGCTCAGAATTTCATTCAAGGGGGTGATCGGATTCCATCATCTCAGTCATTAGGCCATCGTCGTACGAAAATTCACAGGCATCATTAA 1695 0.5386 MASFPSLSFLSLFLFLTLSSANRRHHSPSPKPPSHPTTTATPEIQQACKATRFPQQCESSLTDSTHLPPNPTPIQLLQSAIAVPSNNLVTAQSMVKSILDSSASSRNRTVAATTCIEVLTNSQHRISLANDALPRGRTKDARAWLSAALAYQYDCRNGLMYANDTRAVGETMTFLDSLAVLSSNALSMAFSYDVFGNDTASWKPPQTERDGFWENSESATGSGPNSAGGIPTKSAPDVTVCKGGGNGCYKTVQEAVNAAPDNDGGAAKRFVIYIKEGVYEETVRVPLEKRNVVFLGDGMGKTVITGSANVGQPGMSTYNSATVAVLGDGFMAKDLTIENRAGPDVHQAVAFRSDSDLSVIENCEFLGNQDTLYAHSLRQFYKSCRIVGNVDFIFGNSATIFQDCQIMVRPRQVKPEKGENNAITAHGRTDPAQATGFVFQNCLINGTEDYMALYRSKPQVHKNYLGRPWKEYSRTVFIHSILEALVTPQGWMPWSGDFALKTLYYGEFENSGPGSDLSQRVPWSSKIPADHVLAYSAQNFIQGGDRIPSSQSLGHRRTKIHRHH 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi606g00007 564 PANTHER PECTINESTERASE 18 545 - -
Gabi606g00007 564 MobiDBLite consensus disorder prediction 203 232 - -
Gabi606g00007 564 FunFam Probable pectinesterase/pectinesterase inhibitor 51 42 191 - -
Gabi606g00007 564 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 188 IPR035513 -
Gabi606g00007 564 SMART PMEI_2 39 188 IPR006501 GO:0004857
Gabi606g00007 564 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 191 IPR035513 -
Gabi606g00007 564 Gene3D - 231 554 IPR012334 -
Gabi606g00007 564 Pfam Pectinesterase 237 543 IPR000070 GO:0030599|GO:0042545
Gabi606g00007 564 MobiDBLite consensus disorder prediction 211 229 - -
Gabi606g00007 564 CDD PMEI-like_3 47 188 - -
Gabi606g00007 564 Pfam Plant invertase/pectin methylesterase inhibitor 44 188 IPR006501 GO:0004857
Gabi606g00007 564 FunFam Pectinesterase 231 555 - -
Gabi606g00007 564 SUPERFAMILY Pectin lyase-like 233 548 IPR011050 -
Gabi606g00007 564 NCBIfam pectinesterase inhibitor domain 10 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi606g00007 Gabi-Chr606 75717 77671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi606g00007 33 545 Carbohydrate Esterase AT5G09760 64.466 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi606g00007 - - mtr:11442613 876.7