Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi604g00016 ATGGGTTTCCGTTTGCCTGGTCTTCAAAGGCGCACTGATGTTCCAAAGGGCTATCTTGCAGTTTATGTTGGTGAAAACCAAAAGAAGCGGTTTGTGATTCCTATATCATACTTGAACCAACCTTCAATCCAAGACCTGCTGAGTCAAGTTGAACAAGAATTTGGATTTGATCATCCAATGGGTGGCCTTACAATTCCTTGTAGAGAAGATGTCTTCCTAGAAATCACTTCTCGCTTGCATAGGTCATAA 249 0.4177 MGFRLPGLQRRTDVPKGYLAVYVGENQKKRFVIPISYLNQPSIQDLLSQVEQEFGFDHPMGGLTIPCREDVFLEITSRLHRS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi604g00016 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 79 IPR003676 GO:0009733
Gabi604g00016 82 Pfam Auxin responsive protein 10 78 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi604g00016 Gabi-Chr604 151117 151369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi604g00016 13 72 Calmodulin-binding Proteins AT3G43120 53.333 7.98e-16 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi604g00016 K14488 - gmx:112997797 152.91