Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi604g00012 ATGTCGCCGTCGACCGGAAACTGCAGCAAAATCCGTCGCATTGTTCGAGTGCGTCAAATGCTTCTCCGGTGGCGCACGAAAGCCAGATTAGCGGCGTCCGATGTCCCGGCGGGGCACGTTGCGGTGTGTGTGGGACCCAGCAGGAGGAGGTTCGTTGTGTGCGCTAATTACCTGAACCACCCGATCTTCAAGAAGCTTCTGGTACAAGCGGAGGAAGAGTACGGGTTCTGCAACCATGGCCCCCTTGCGATACCCTGCGATGAGTCTCTATTCGAAGAGCTTCTTCGGGTTATGACCCGACCCGAACCTTGCATCTCCACCTTCGAAGATATCAAGAGGTGTTGCCACGTCGATGTTCGAAGTAATAGTAGTAATTTTGACTTTGTAGGAGAATCACGGCCCTTGCTTCATGACGAGCCAATCTGCTGA 429 0.5385 MSPSTGNCSKIRRIVRVRQMLLRWRTKARLAASDVPAGHVAVCVGPSRRRFVVCANYLNHPIFKKLLVQAEEEYGFCNHGPLAIPCDESLFEELLRVMTRPEPCISTFEDIKRCCHVDVRSNSSNFDFVGESRPLLHDEPIC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi604g00012 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 94 IPR003676 GO:0009733
Gabi604g00012 142 Pfam Auxin responsive protein 23 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi604g00012 Gabi-Chr604 122547 123443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi604g00012 6 136 Calmodulin-binding Proteins AT4G34750 52.055 7.05e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi604g00012 K14488 - gmx:100795345 208.379