Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi604g00009 ATGGGTGATAATGAAGATGTGAATAATGACATGATGCAGAGGCTTCACTCTTCATCTTTTGGAGCTTCTTCATCTTCGTTTCTGAAACAGTCTATAAACATGGACCAACTCAGCATACCCCAATTTAATCCCTCACAAATGCGCGCTAGGCATCAACAACATCAGCATCATTTTCAGCAGAGTTTCGGTGTTGGAGATGGTAACAAAAGAGTAGGAATACCACCTTCGCACCCTCATCAGATCCCACCCATTTCACCTTATTCTCAGATCCGACCCCAAATGAGTTCACAGAATGTTTCACCTACACCTACACATTCGCGATCACTGTCACAACCGTCCTTTTTCTCACTTGATTCTCTTCCCCCTTTGAGCCCTTCTCCTTTTCGGGACTCATCTTCAACTTCAATGTCAGACCCTGTTTCTGCTGATGTATCAATGGAAGATCGTGATGTGAGTTCACATTCTTTGTTGCCGCCATCATCGCCTTTCACTAGGGGTGGCAACAACCCTTCTCGGGTTGGAGAGAGTTTACCTCCTCGCAAAGCGCATAGGCGCTCTAACAGTGATATCCCATTTGGATTTTCTACTGTGTTGCAATCTTCTCCACCCCTTATTCCTCTCAGGGGTTCAGTAAACCCGGGTGTGGCAAAACCTGCACAGTTGGTCAAAAAGGAAACAACTTGGGATAGGAGCGTTGACCATAATGCAGAGGGATCCGGTGAGAAGAAATCCCCTGAGGGGGAAGTTGTGGATGATCTCTTCTCTGCTTACATGAATTTGGATAACATTGATGCATTGAACTCTTCGGGGACAGATGACAAAAACGGTGCTGAAAATCGTGATGATTTGGACAGTAGAGCTAGTGGAACAAAGACTAATGGAGGTGATAGCAGTGACAATGAAGCAGAAAGCAGTGTAAACGAGAGTGGGGATAGTATGCAAAGGCAAGGATTGGTTTCTTCGGTTGAGAAGAGGGAAGGGTTGAAGAGGAGTTTGGGAGGTGATATTGCACCAACCAGCAGGCACTATAGGAGTCTTTCAATGGATAGTTTTGTTGGGAAGTTGAACTTTAATGATGACTCACCTAAGCTACCACCTTCACCTGGTCCTGGTCCTGGAATGATTTCACCTGGCAATGCAATTGATGGAAATTCAGCTGCTTTCAGCTTGGAGTTTGGAAATGGTGAATTTAGTGGACCTGAACTGAAGAAAATTATGGCCAATGAAAAGCTTGCTGAGATTGCTTTGTCAGATCCAAAGCGTGCTAAGAGGATTTTGGCAAATCGGCAATCAGCTGCACGTTCCAAAGAACGGAAGATGCGTTACATTTCAGAACTAGAACATAAGGTTCAGACTCTACAGACAGAAGCCACCACACTATCTGCACAGCTTACTCTATTACAGAGAGATTCTGTTGGACTCACTAACCAGAATAGTGAGTTGAAGTTTCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTAAATGAGGCGCTTACTGCTGAGGTTCAAAGACTAAAGCTTGCTACAGCTGAGCTGAATGGCGAGTCACACCCTTCTGGCTGCTTGATTCCACAACATTCTGTCAACCCTATGATGTTCCAGCACCAGCAGCAGCCTCCTACTGCATCCCAACAAAACATTCATCTTCAGCAACATCAGCATCAGCATCAGCATCAGGCACAACAGCAGAATGGTAATGCCAACTCCAAGACCGACATAAAACAATAA 1740 0.4511 MGDNEDVNNDMMQRLHSSSFGASSSSFLKQSINMDQLSIPQFNPSQMRARHQQHQHHFQQSFGVGDGNKRVGIPPSHPHQIPPISPYSQIRPQMSSQNVSPTPTHSRSLSQPSFFSLDSLPPLSPSPFRDSSSTSMSDPVSADVSMEDRDVSSHSLLPPSSPFTRGGNNPSRVGESLPPRKAHRRSNSDIPFGFSTVLQSSPPLIPLRGSVNPGVAKPAQLVKKETTWDRSVDHNAEGSGEKKSPEGEVVDDLFSAYMNLDNIDALNSSGTDDKNGAENRDDLDSRASGTKTNGGDSSDNEAESSVNESGDSMQRQGLVSSVEKREGLKRSLGGDIAPTSRHYRSLSMDSFVGKLNFNDDSPKLPPSPGPGPGMISPGNAIDGNSAAFSLEFGNGEFSGPELKKIMANEKLAEIALSDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGESHPSGCLIPQHSVNPMMFQHQQQPPTASQQNIHLQQHQHQHQHQAQQQNGNANSKTDIKQ 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi604g00009 579 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 418 481 IPR004827 GO:0003700|GO:0006355
Gabi604g00009 579 FunFam probable transcription factor PosF21 419 472 - -
Gabi604g00009 579 Coils Coil 499 519 - -
Gabi604g00009 579 Gene3D - 419 471 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 154 171 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 203 250 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 538 579 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 38 189 - -
Gabi604g00009 579 SUPERFAMILY Leucine zipper domain 420 471 IPR046347 GO:0003700|GO:0006355
Gabi604g00009 579 SMART brlzneu 416 480 IPR004827 GO:0003700|GO:0006355
Gabi604g00009 579 Coils Coil 436 470 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 86 141 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 266 340 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 288 319 - -
Gabi604g00009 579 Pfam bZIP transcription factor 420 474 IPR004827 GO:0003700|GO:0006355
Gabi604g00009 579 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 153 573 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 223 249 - -
Gabi604g00009 579 MobiDBLite consensus disorder prediction 1 23 - -
Gabi604g00009 579 CDD bZIP_plant_RF2 421 470 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi604g00009 Gabi-Chr604 82951 87826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi604g00009 1 539 bZIP Transcription Factor Family AT4G38900 59.574 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi604g00009 bZIP_1 7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi604g00009 - - qsa:O6P43_002051 715.301