Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi603g00003 ATGGCCCTTTCAGACAATTCTCTGATCCCAAAGTTCCTCTACTCGTCCTCACAACAGAAGAAGATGGTGGCGAACTCTGCCATCCCCGTGGCGGCATCTTCGCCGCCACCTTCGAATTCAAACTTCATGATTCCAGCTCCGAGCGAGCCTGGCAAAATCCAGATGTTCTCGCCGGCCTACTATGCAGCTTGCACCGTTGGTGGAAGCCTCTGTTGTGGCCTCACTCACATGGGCATTACACCTCTTGACGTTCTCAAATGTAATATGCAGATTGACCCTGTGAAGTACAAGAACATATCCTCTGGATTTGGAGTTTTGCTTAAGGAGCAAGGACTTAGGGGCTTTTTCCGGGGATGGGCACCTACATATCTGGGTTACAGCGCACAAGGTGCCTTGAAATATGGATTCTATGAGTACTTTAAGAAATACTATTCTGATATTGCTGGCCCGGAATATGCAACCAAGTACAAGACCTTAATCTACCTTGCTGGTTCTGCATCTTCCGAGTTAATTGCTGATGTTGCTCTTTGCCCCTTTGAGGCCGTCAAGATCAGAGTTCAAACTCAACCTGGTTTTGCTAGAGGCCTTGCTGATGGGTTACCCAAATTGGTTAAATCTGAAGGAGTCTCAGGGCTGTACAAGGGAATTGTGCCTTTGTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTATGAGAACATTGTTGAGATGATCTATAAGCATGCTATTCCCACACCAAAAGATGAATGCAGTAACACTTTGCAACTTGGTGTGAGTTTTGCTGGTGGATATATAGCTGGTATATTATGTGCAGTTGTGTCTCATCCTGCTGATAACATTGTCTCTTTCCTTAACAATTCCAAAGGGGCAACAATTGGTGATGCTGTAAAGAATCTTGGATTGTGGGGTCTATTTACCCGTGGTCTCCCTCTACGTATTTTCATGATTGGAACTCTCACTGGAACTCAATGGGGAATTTATGATTCATTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGTGTTGCTCCTGCTGCTGTTCCTGCTCACGCTTCAGCTACTTAA 1074 0.4553 MALSDNSLIPKFLYSSSQQKKMVANSAIPVAASSPPPSNSNFMIPAPSEPGKIQMFSPAYYAACTVGGSLCCGLTHMGITPLDVLKCNMQIDPVKYKNISSGFGVLLKEQGLRGFFRGWAPTYLGYSAQGALKYGFYEYFKKYYSDIAGPEYATKYKTLIYLAGSASSELIADVALCPFEAVKIRVQTQPGFARGLADGLPKLVKSEGVSGLYKGIVPLWGRQVPYTMMKFASYENIVEMIYKHAIPTPKDECSNTLQLGVSFAGGYIAGILCAVVSHPADNIVSFLNNSKGATIGDAVKNLGLWGLFTRGLPLRIFMIGTLTGTQWGIYDSFKVFVGLPTTGGVAPAAVPAHASAT 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi603g00003 357 FunFam Phosphate carrier protein, mitochondrial 59 337 - -
Gabi603g00003 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 156 240 IPR018108 -
Gabi603g00003 357 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 28 347 IPR044677 GO:0005315|GO:1990547
Gabi603g00003 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 257 336 IPR018108 -
Gabi603g00003 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 59 143 IPR018108 -
Gabi603g00003 357 SUPERFAMILY Mitochondrial carrier 60 331 IPR023395 -
Gabi603g00003 357 Pfam Mitochondrial carrier protein 159 244 IPR018108 -
Gabi603g00003 357 Pfam Mitochondrial carrier protein 61 145 IPR018108 -
Gabi603g00003 357 Gene3D Mitochondrial carrier domain 151 338 IPR023395 -
Gabi603g00003 357 Gene3D Mitochondrial carrier domain 56 150 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi603g00003 Gabi-Chr603 44841 49977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi603g00003 1 356 Chloroplast and Mitochondria Gene Families AT5G14040 71.046 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi603g00003 K15102 - twl:119993760 560.451