Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi59g00013 ATGGCTTCTTTGTCGCTTTCATCTTTGCATGCTTCAACATTCCTCTTGGCAATTCTCATTTTCATCTTGTTTTGCATGCCATATTGTGTTCTTGGCTATGATGCACAAACGGTCATAGACTCTCCTATGTTAACAGAGAAGTTAGGAATTAATCGCACTATCAAAGTAGATATCAACGGCAATGGGGAATTCAAATCTGTCCAAGCTGCCATCGATTCCATTCCTGAAGGAAATTCTAATTGGGTCATCGTTCATGTTAGGAAAGGAGTATATAGGGAAAAAGTGCACATACCAAAGACTAAGCCTTATATATTCTTGAGAGGGAATGGAAGAGGAAAAACTGCTATAGTTTGGTCTGAAAGCTCTTCTGACAACATAGCTTCTGCTACCTTCAAAGTCGAAGCCCATGACTTCTTTGCCTTTGGAATTAGCTTCAAGAATGAGGCACCCACAGGGGTTGCCTATACCTCGCAGAATCAATCAGTGGCAGCATTTGTGGCAGCAGACAAAGTTGCATTTTACCATTGTGCATTTTACAGTACTCATAACACTCTCTTTGATTACAAAGGAAGACATTACTATGAGTCTTGTTATATTCAAGGCTCAATTGATTTCATATTTGGCCGTGGCAGATCCATCTTCCATGGCTGTGAGATATTTGTGATTGATGACAAAAGGATAACAATTCATGGGTCAGTCACAGCTCAAAACAGGGAAAGCGAACCTGAGATTAGTGGGTTTATCTTTATCAAAGGCAAGGTTTATGGCATTGGAGGGGTGTACCTAGGAAGGGCCAAGGGTCCTTATTCTAGGGTCATTTTTGCTAAGACATACCTATCAAAGACCATTGTCCCAGAGGGGTGGACCAATTGGAGCTATGAGGGTAGCACAGTAAATCTATTCCACGCGGAATACAAGTGCCATGGACCTGGAGCCACTACAGAGGGACGTGCTCCTTGGTCAAAGCAACTAACTGATGAACAAGTTGCACCATTTTTATCTGTTGATTACATTGATGGCAAGAATTGGTTGCCAGTTTGGCAATAA 1047 0.4174 MASLSLSSLHASTFLLAILIFILFCMPYCVLGYDAQTVIDSPMLTEKLGINRTIKVDINGNGEFKSVQAAIDSIPEGNSNWVIVHVRKGVYREKVHIPKTKPYIFLRGNGRGKTAIVWSESSSDNIASATFKVEAHDFFAFGISFKNEAPTGVAYTSQNQSVAAFVAADKVAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFHGCEIFVIDDKRITIHGSVTAQNRESEPEISGFIFIKGKVYGIGGVYLGRAKGPYSRVIFAKTYLSKTIVPEGWTNWSYEGSTVNLFHAEYKCHGPGATTEGRAPWSKQLTDEQVAPFLSVDYIDGKNWLPVWQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi59g00013 348 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 50 344 - -
Gabi59g00013 348 Gene3D - 48 347 IPR012334 -
Gabi59g00013 348 Pfam Pectinesterase 55 340 IPR000070 GO:0030599|GO:0042545
Gabi59g00013 348 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Gabi59g00013 348 FunFam Pectinesterase 49 348 - -
Gabi59g00013 348 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi59g00013 Gabi-Chr59 128365 129926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi59g00013 56 344 Carbohydrate Esterase AT1G05310 41.216 6.82e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi59g00013 - - gmx:100792967 603.979