Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi59g00010 ATGGGAACCCCATCATCAGAACAAGAGCTTCTCAAGAAGATTGAATGTCTGGAAGCTGGTCATGCTCATCTCAAGCAAGAAATGTCGAAGCTCAAACTCTCACAGCAACGCAGGTCTCACTCCGTGTCACCGCAGCGTTCTAGGTTGGGTGCTGCGTATAACAAAGGCTCTTCTTCACCTTTGCGGAAGGAGAGTAGCAATCAAGATCCTCAACATCAAAATGATGGGCAGTATCTCAATATCTTGCAGTTAATGGGTCATTCTGTTCATATATTGGATCTTCAATGTCGTATCATATACTGGAACCGTAGTGCTGAAAATCTGTATGGTTATGCAGCAGCAGAAGTTCTTGGACTGGACGGGATTGAGCTACTTGTAGACCCCAGAGATTTTGCCTCAGCCTATGATATATTCAACCATGTCAAACTGGGAGAGAGCTGGACTGGCCAATTCCCTGTCAAGAATAAGATGGGGGACAAGTTTTTAGCTGTAGGGACCAATACACCTTTCAATGATGATGATGGAAGCTTGATTGGGATTATTTGTGTCTCCAGTGATTCACGACCCTTTCTTGAAACCAGAGTTCCCTTTTCAGTAGTGAAGAATGCAGAACCAGATTCGGGTTCCAACTGTCCTAGAAGTAGCATTGCAAATAAACTCGGCCTTGACTCTCAGCTGCCACTTCAAGTTGCTCTAGCATCAAAAATCTCAAATTTGGCATCAAAGGTGAGCAACAGAGTTAAGTCTAGAATCCGGACTGGAGAAAATAATGTCAACCGTGAAGGTGGGAGCGGAGAAAGTCATCATTCTGAGCTTAGTTTCTCAGACTATGTTCTCTCTGATCAGAGAGATGATGGTAACTCCAGTGGAGCTAGCACACCCAGAGGAGAGGTGCCACCATCTCCTTTTGGAGTATTTTTTCATGTTGAAGAGAAATCCCAAGCAAAAACTATGAGAGACTATGGCGATGAGAGTGAAGGAAAACCTATTCACAAGATCATAACTTCTAAGGCTGAAGCATGGATTCAAAAGAGAACATTATCATGGCCATGGAGAGCAAATGATCGAGAAGGATCTGAGGGAAGGAATATTCATGTTGCTTGGCCTTGGTTTCAGGGAGATCAAGAAAATGAGCCAGTTGATCAGAAGAATCTTTCTTCTCCATTGAAGCCAGAAAGCCTGGCAGGTGAGAGTCATCGACCTGCTAATAATGAGGCTTCAGGATCATGGTCCTCTTTTAATGTTAACAGCACAAGCAGTACCAGCAGCTGTGGGAGTGGCAGCAGTTCTGTGGTCAATAATAAAGTAGATGTTGACACTGATGGCTTGGATTATGAAATTTTGTGGGAGGACCTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGAATGGATCAGATGTTGCTGTCAAGGTTATCTCAAACCCAGAATACTCAGATGATGTGATACAGTCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGTCATCCAAATATTCTTCTCTTTATGGGGGCAGTAACTTCACCTCAACGTCTCTGCATAGTGACAGAGTTTCTCCCACGTGGAAGCTTGTTGCGTTTGCTCCAGAGAAATACATCCAAACTTGATTGGAGACGGCGAGTTCATATCGCTTTAGATATTGCACGAGGTGTAAATTATCTTCATCATTGCAACCCCCCAATCATCCATCGAGATTTAAAGTCTTCAAATCTTCTAGTTGATAGGAATTGGAGTGTGAAGGTTGGTGATTTTGGTCTTTCGCGTCTTAAGCATAAAGCATATCTCACAACTAAGACTGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAATCCTCAGATGAGAAGTCTGATGTTTACAGCTTTGGGGTGATATTGTGGGAACTTACAACTGAAAAGATCCCTTGGGATACTCTCAACCCAATACAGGTTATTGGAGCTGTAGGATTTATGAACAATCGGCTAGAAATTCCAGATGATGCTGATCCACAGTGGGCTTCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCTTGCCGACCAACATTCCAAGAACTGATGGAAAGGCTTAGAGAACTACAGAGACGGTATGCCATTCAGTTCCAAGTAGCCCGGTCTGCTGGTGGGGAAGGCACTCAAAAGGAGTCATAG 2193 0.4387 MGTPSSEQELLKKIECLEAGHAHLKQEMSKLKLSQQRRSHSVSPQRSRLGAAYNKGSSSPLRKESSNQDPQHQNDGQYLNILQLMGHSVHILDLQCRIIYWNRSAENLYGYAAAEVLGLDGIELLVDPRDFASAYDIFNHVKLGESWTGQFPVKNKMGDKFLAVGTNTPFNDDDGSLIGIICVSSDSRPFLETRVPFSVVKNAEPDSGSNCPRSSIANKLGLDSQLPLQVALASKISNLASKVSNRVKSRIRTGENNVNREGGSGESHHSELSFSDYVLSDQRDDGNSSGASTPRGEVPPSPFGVFFHVEEKSQAKTMRDYGDESEGKPIHKIITSKAEAWIQKRTLSWPWRANDREGSEGRNIHVAWPWFQGDQENEPVDQKNLSSPLKPESLAGESHRPANNEASGSWSSFNVNSTSSTSSCGSGSSSVVNNKVDVDTDGLDYEILWEDLTIGEQIGQGSCGTVYHALWNGSDVAVKVISNPEYSDDVIQSFRQEVSVMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLLRLLQRNTSKLDWRRRVHIALDIARGVNYLHHCNPPIIHRDLKSSNLLVDRNWSVKVGDFGLSRLKHKAYLTTKTGKGTPQWMAPEVLRNESSDEKSDVYSFGVILWELTTEKIPWDTLNPIQVIGAVGFMNNRLEIPDDADPQWASIIESCWHSDPACRPTFQELMERLRELQRRYAIQFQVARSAGGEGTQKES 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi59g00010 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Gabi59g00010 730 SUPERFAMILY Protein kinase-like (PK-like) 439 704 IPR011009 -
Gabi59g00010 730 ProSiteProfiles PAS repeat profile. 74 145 IPR000014 -
Gabi59g00010 730 CDD STKc_MAP3K-like 458 704 - -
Gabi59g00010 730 CDD PAS 89 186 IPR000014 -
Gabi59g00010 730 Coils Coil 7 27 - -
Gabi59g00010 730 SMART pas_2 76 143 IPR000014 -
Gabi59g00010 730 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 207 708 - -
Gabi59g00010 730 MobiDBLite consensus disorder prediction 27 74 - -
Gabi59g00010 730 MobiDBLite consensus disorder prediction 250 303 - -
Gabi59g00010 730 SUPERFAMILY PYP-like sensor domain (PAS domain) 80 183 IPR035965 -
Gabi59g00010 730 Gene3D Transferase(Phosphotransferase) domain 1 530 728 - -
Gabi59g00010 730 PRINTS Tyrosine kinase catalytic domain signature 565 583 IPR001245 GO:0004672|GO:0006468
Gabi59g00010 730 PRINTS Tyrosine kinase catalytic domain signature 631 653 IPR001245 GO:0004672|GO:0006468
Gabi59g00010 730 PRINTS Tyrosine kinase catalytic domain signature 526 539 IPR001245 GO:0004672|GO:0006468
Gabi59g00010 730 PRINTS Tyrosine kinase catalytic domain signature 675 697 IPR001245 GO:0004672|GO:0006468
Gabi59g00010 730 PRINTS Tyrosine kinase catalytic domain signature 612 622 IPR001245 GO:0004672|GO:0006468
Gabi59g00010 730 Gene3D PAS domain 87 189 - -
Gabi59g00010 730 MobiDBLite consensus disorder prediction 374 410 - -
Gabi59g00010 730 SMART serkin_6 452 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi59g00010 730 Pfam PAS domain 90 186 IPR000014 -
Gabi59g00010 730 MobiDBLite consensus disorder prediction 35 74 - -
Gabi59g00010 730 Pfam Protein tyrosine and serine/threonine kinase 452 704 IPR001245 GO:0004672|GO:0006468
Gabi59g00010 730 MobiDBLite consensus disorder prediction 377 391 - -
Gabi59g00010 730 MobiDBLite consensus disorder prediction 268 295 - -
Gabi59g00010 730 NCBIfam PAS domain S-box protein 78 186 IPR000014 -
Gabi59g00010 730 ProSiteProfiles Protein kinase domain profile. 452 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi59g00010 730 Gene3D Phosphorylase Kinase; domain 1 445 529 - -
Gabi59g00010 730 FunFam PAS domain-containing protein tyrosine kinase 445 529 - -
Gabi59g00010 730 FunFam PAS domain-containing protein tyrosine kinase family protein 530 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi59g00010 Gabi-Chr59 75467 94616 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi59g00010 1 721 MAP Kinase Kinase Kinase AT3G06620 59.162 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gabi59g00010 PK_Tyr_Ser-Thr 7.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi59g00010 - - gmx:100815858 1077.39