Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi597g00004 ATGGGAACCTCTTCAAACCGAAGCGCCACCGTGCACAAGGACGTTGACTATGCACAGTACTTCTGCACCTATGCTTTCCTTTACCATCAGAAGGAGATGCTCTCCGATCGGGTTCGCATGGATTCTTACTTTAATGCCATTTTTGAGAACAAACGTCACTTCATTGGAAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAAGAAGGTATATGCAGTGGAAGCTACCAAGATGTCAGAACACGCCCGTGCACTTGTCAAAGCAAATAATCTCGAAGGAATAGTTGAAGTCATCGAGGGCTCAATGGAGGATGTTACCTTGCCGGAGAAAGTTGACGTGATCATCTCTGAGTGGATGGGTTATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATATGTGCTCGTGACCGCTGGCTCAAGCCAACAGGAGTGATGTATCCCAGTCATGCACGTATGTGGATAGCACCTATGAGGACTGGGATAGGAGATCACAAAATGGGTGATTACCAATCAACTATGGATGATTGGCACAACTTTGTTGATGAAACAAAGACCTACTATAGCGTTGATATGAGCACTTTAACGAAGCCTTTTTCAGAGGAGCAGAGAAAATACTATCTACAGACATCATTGTGGAACAACCTTCATCCACATCAAGTCATAGGAACTGCTGCAATAATAAAGGAAATTGATTGTTTGACTGCCACAGTGGCTGATATAGAGAAAGTCAGATCAAAGTTTTCTTTATCAATAACCATCGAAAACACAAAGTTGTGTGGATTTGCAGGGTGGTTTGATGTACATTTTAGGGGTAGAAGCGAGGATCCAGCTGAACATGAGATTGAGTTAACTACAGCTCCCAGCGTAGATTACAATACGCACTGGGGCCAACAGGTTTTCCTCTTGCATCCTTCTACCCATGTGAGTGAAGGTGATAATTTAAGTGTTTCTTTCCTAATGAGTCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGAGCTTGGGTGTGAGATTCAACAGCATTCTGGCAAGCTTATTGCACCCTTCAAAAATAAGTACTACGTAGAATGA 1107 0.4309 MGTSSNRSATVHKDVDYAQYFCTYAFLYHQKEMLSDRVRMDSYFNAIFENKRHFIGKTVLDVGTGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLEGIVEVIEGSMEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWIAPMRTGIGDHKMGDYQSTMDDWHNFVDETKTYYSVDMSTLTKPFSEEQRKYYLQTSLWNNLHPHQVIGTAAIIKEIDCLTATVADIEKVRSKFSLSITIENTKLCGFAGWFDVHFRGRSEDPAEHEIELTTAPSVDYNTHWGQQVFLLHPSTHVSEGDNLSVSFLMSRSKENHRLMEVELGCEIQQHSGKLIAPFKNKYYVE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi597g00004 368 CDD AdoMet_MTases 58 158 - -
Gabi597g00004 368 FunFam Protein arginine N-methyltransferase PRMT10 14 159 - -
Gabi597g00004 368 FunFam Protein arginine N-methyltransferase PRMT10 161 368 - -
Gabi597g00004 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 24 352 IPR029063 -
Gabi597g00004 368 Gene3D - 161 368 - -
Gabi597g00004 368 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 14 345 IPR025799 GO:0016274|GO:0018216
Gabi597g00004 368 Pfam Ribosomal protein L11 methyltransferase (PrmA) 56 127 - -
Gabi597g00004 368 Gene3D Vaccinia Virus protein VP39 14 159 IPR029063 -
Gabi597g00004 368 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 13 352 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi597g00004 Gabi-Chr597 125454 138945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi597g00004 19 327 C2H2 Transcription Factor Family AT3G12270 30.909 2.89e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi597g00004 K11434 - gmx:100795134 678.322