Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi595g00009 ATGGCAAATGAGGAAATCTCTAACATTGAACTCATAGTAAGGCAAGGAGAACCAACTCGAGTTCTGCCTGCAGAGGAAACAGAAAAGGGACTCTATTTCCTTTCAAACCTTGACCAGAATATTGCAGTTCCAGTTCGCACAGTTTATTGCTTTAAATCCACTTCAAGAGGAAATGAGGATGCTGCACAAGTTATCAAGGATGCATTGTCAAAGATTCTTGTTCCTTATTACCCTATGGCAGGAAGGTTGACTATCAGCTCAGAAGGGAAGTTGATCGTGGATTACACAGGGGAGGGTGCAGTGTTTGTTGAGGCTGAAGCAAATTGTAACATAGAAGACATAGGGGACTTAACAAAGCCAGACCCTGAGACTCTTGGAAAATTGGTTTATAACATCCCTGGTGCTCAGAACATACTTGACATGCCTCTTATTGCAGTTCAGGTGACAAAGTTCAAATGTGGAGGATTCACTTTGGGGCTAAACATGAACCATTGTATGAAAGATGGACTATGTGCCATGGAATTTGTGAATGCATGGAGTGAGACATCCCGGGGTTTGGACTTAAAGATTCCACCATTTCTTGATCGAACCATACTCAAAGCACGTAACCCTCCCAAGATAGAGTTCCAACACAATGAATTTGTTGAGATTGAAGATGTATCAGGTACTAAAAAACTTTATGAAGAAGAAAAGATGCTCTACAGATCCTTCTGTTTTGATCCTAAGAAGCTTGAGCTGCTAAGGAAAAAGGCCACTGAAGATGGGGTTTTGGAAAAGTGTTCAACTTTTGAAGCCCTCTCAGCTTTTGTATGGAGAGCTAGAACAGCAGCATTAAGGATGCATCCTGATCAAAAAACAAAGCTACTCTTTGCAGTTGATGGAAGGTCTAGATTTGTGCCTCCAATACCTGAGGGTTACTTTGGCAATGCTATTTTGCTAACAAATTCACTATGTAAGGCAAGTGAGTTATTGAAGAATCCTCTGTCATTTGCAGTGGGATTGATTCACAAGGCAATTGAAATGGTCACAGATAGTTATATGAGATCTGCTATTGACTATTTTGAAGTCACAAGAGCTAGACCTTCCCTAACAGCTACCCTTTTGATCACAACTTGGACTAAGTTATCTTTCCATACTACAGATTTTGGTTGGGGAGAACCTTTGTGTTGTGGCCCTGTGACCTTGCCTGAGAAAGAGGTCATTTTGTTCTTATCACATGGTCAAGACAGGAAAAACATAAATGTGCTCCTGGGTTTGCCTGCTTCTGCCATGGAAATTTTTGAAGCATTGATGATGAAGGTATGA 1305 0.41 MANEEISNIELIVRQGEPTRVLPAEETEKGLYFLSNLDQNIAVPVRTVYCFKSTSRGNEDAAQVIKDALSKILVPYYPMAGRLTISSEGKLIVDYTGEGAVFVEAEANCNIEDIGDLTKPDPETLGKLVYNIPGAQNILDMPLIAVQVTKFKCGGFTLGLNMNHCMKDGLCAMEFVNAWSETSRGLDLKIPPFLDRTILKARNPPKIEFQHNEFVEIEDVSGTKKLYEEEKMLYRSFCFDPKKLELLRKKATEDGVLEKCSTFEALSAFVWRARTAALRMHPDQKTKLLFAVDGRSRFVPPIPEGYFGNAILLTNSLCKASELLKNPLSFAVGLIHKAIEMVTDSYMRSAIDYFEVTRARPSLTATLLITTWTKLSFHTTDFGWGEPLCCGPVTLPEKEVILFLSHGQDRKNINVLLGLPASAMEIFEALMMKV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi595g00009 434 Gene3D - 218 433 IPR023213 -
Gabi595g00009 434 FunFam Tryptamine hydroxycinnamoyl transferase 218 432 - -
Gabi595g00009 434 Gene3D - 13 216 IPR023213 -
Gabi595g00009 434 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Gabi595g00009 434 Pfam Transferase family 18 429 - -
Gabi595g00009 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi595g00009 Gabi-Chr595 163546 165369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi595g00009 19 434 Monolignol Biosynthesis Gene Families AT5G48930 36.806 1.71e-92 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi595g00009 K15400 - gmx:100794490 751.895