Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi593g00014 ATGGAGTGTAATAAGGATGAGGCCACCAGAGCTAAAGTAATTGCTGAGAGGAAGTTTACTGCAAAGGATACTTTGGGTGCAAAGAAGTTTGCTTTGAAGGCCCAAAATTTATTTCCTGCTCTTGATGGTATTCCTCAATTGGTAGCAACACTTGACGTGTATATTTCTGCTGAGAATAAAATAAATGGAGAAGCAGATTGGTATGGCATACTTGGTGTAGACCCCCTTGCCGATGATGATACAGTCAGGAAACAATACAGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCCATTGGAGCTGACGGTGCCTTTAAACTTATTTCAGAGGCATGGAGTTTACTATCTGATAAGGCTAAAAGGGAAGCTTATGATGAGAAGAGAAATGGTAAAGCACAGAAAGGTCCAACTAAGTTTGGTGGTTCATCAGCAAAAACAGGGGCTAATGGCAGTCACAGCTTTACCAAGACTACCACTTCAAGTGCTACGACTCAGAAGAATACTGCTAAAGAGCACACTTCATCTTCTACCCATAAGTCAAAATCAAATACATTTTGGACTGTTTGCCGTCGATGCAAAATGCAGTATGAGTATCTCAGAGTTTATCTTAACCTTAAACTCTTATGTCCCAACTGCCATAATGCATTTTTGGCTGTAGAAACTGCTCCTCCACCTGCAAGTGGTATTAGACCTGGATATTCGTGGACACAGAATCAGAAAAATTTCAATCACCAATTTCCTAATAAAAGCAAATCTAATGCTGGAAAGAACAACATGGCAGCCCCAAATGTTGGAGGAGGGTCCTATAGTAAAACTGATTCCTATAACAAAACCAGTTTCCAATGGGCTCCATTCTCAAAAACTTCTGGTGTTTCCAATGTGGCTCAGGCTGCAAGTGTGGTTCAGCAGGCATATGATAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCAGCTACCAAAAGGGAAGAGGCCCTAAAAAGGAAACAGCATGTTTCCAAAAGAGGTCACTTTAATCCTGCTAAGAGAAGAAAGGGGGGAATGGAGGATGCAAGTATGAGTAACCATGGTAAGGAACCTGTAAATCGAATGGGAGTGGGAAACGGAGCAGCAGGAGCATCTAACTCGGGCAGATCTAAACAGGGTAATTTTGAATATAGTAGGGTTAGTGGAATCAATAAGACCAGTGGCGCAAGAGATGTCTCCACAATTGAACTTCAGAATCTTCTTATGGAGAAAGCTAGAAAAGAAATTACCAAGAGACTTGGGGAAATTCAGTCAAATACTGCTGATAAAACATTGGTGTTAGACAGTGGAAATGGCTTCCAGAAAGAAAATGAGAATGGAGAAAAATCTTTAAGAGACTGTGAGACACGTGCTCAAAATAACATTGGGAAATCAGAATACAAAAATAGCGGATCCCAAGCCATCAAGTCATTTGCAGGTACTACTATTGCTAAAACAAGTACCAAATTTTTTGAAACTATGCAAATAGATGTCCCTGATCCTGATTTCCATGATTTTTACAAGGATCGAACTGAAAGATCTTTTCGTGAAAATCAAGTATGGGCTGTGTATGATGATGATGATGGGATGCCTCGATGTTATGCAATTATCCGCAGCATGAATTCTCTGAATCCATTCAAGATGCGAATCAGTTGGCTCATCCCAAATACCAACAGCGAACTGGGCCCCCTAAATTGGGTCGCTTCAGGCTTTTCAAAAACTTGTGGGGATTTCAGAATAGGCAGACATGGAATCTGTAACTCCATCAATTTATTTTCTCACAAGGTTAGATGGAGAAAAGGTAATGATGGAGCCGTTCAAATATATCCTATGAAAGGGGATGTTTGGGCCATCTACCAGAACTGGTCTCCTGACTGGAATGAGCTGACAGCAGATGAGGTTATACACAAGTTTGATATGGTTGAAGTGCTTGAGGATTTTACTGAAGAGCACGGTGTAACTGTTATTCCTCTGGTCAAAGTGGCTGGGTTCAAAACTGTATTTCACCACCACTTAGATCCAAGAGAAATCAGGATCATTCCAAGGGAAGAGATATTTAAGTTCTCTCATCGGGTCCCTTCATACTCACTCACTGGTGGAGAAGCTCCAAATGCCCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCTACTCCATTGGAACTGCTTCAGGTGATAGAAGTTGTGAAGGAGGAAGACATGGTGGACAATGAGGATAATGTTATTAAAGAAACAAGTGATAATATGAAAGAAGCTAATTGTGAGGAAAATATCATTGATGTGGACAAACTTAGGGAGGAAAAGGAGGGAAATAATAAAGATATCAAGGTAATAGAAATTTAG 2349 0.4121 MECNKDEATRAKVIAERKFTAKDTLGAKKFALKAQNLFPALDGIPQLVATLDVYISAENKINGEADWYGILGVDPLADDDTVRKQYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKAKREAYDEKRNGKAQKGPTKFGGSSAKTGANGSHSFTKTTTSSATTQKNTAKEHTSSSTHKSKSNTFWTVCRRCKMQYEYLRVYLNLKLLCPNCHNAFLAVETAPPPASGIRPGYSWTQNQKNFNHQFPNKSKSNAGKNNMAAPNVGGGSYSKTDSYNKTSFQWAPFSKTSGVSNVAQAASVVQQAYDKVKRDREEAQAATKREEALKRKQHVSKRGHFNPAKRRKGGMEDASMSNHGKEPVNRMGVGNGAAGASNSGRSKQGNFEYSRVSGINKTSGARDVSTIELQNLLMEKARKEITKRLGEIQSNTADKTLVLDSGNGFQKENENGEKSLRDCETRAQNNIGKSEYKNSGSQAIKSFAGTTIAKTSTKFFETMQIDVPDPDFHDFYKDRTERSFRENQVWAVYDDDDGMPRCYAIIRSMNSLNPFKMRISWLIPNTNSELGPLNWVASGFSKTCGDFRIGRHGICNSINLFSHKVRWRKGNDGAVQIYPMKGDVWAIYQNWSPDWNELTADEVIHKFDMVEVLEDFTEEHGVTVIPLVKVAGFKTVFHHHLDPREIRIIPREEIFKFSHRVPSYSLTGGEAPNAPKGCRVLDPAATPLELLQVIEVVKEEDMVDNEDNVIKETSDNMKEANCEENIIDVDKLREEKEGNNKDIKVIEI 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi593g00014 782 Coils Coil 737 757 - -
Gabi593g00014 782 SMART dnaj_3 65 122 IPR001623 -
Gabi593g00014 782 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gabi593g00014 782 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gabi593g00014 782 PRINTS DnaJ domain signature 122 141 IPR001623 -
Gabi593g00014 782 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gabi593g00014 782 PANTHER BNAC03G44070D PROTEIN 1 721 - -
Gabi593g00014 782 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gabi593g00014 782 Pfam DnaJ domain 66 127 IPR001623 -
Gabi593g00014 782 MobiDBLite consensus disorder prediction 313 364 - -
Gabi593g00014 782 Gene3D DnaJ domain 63 182 IPR036869 -
Gabi593g00014 782 MobiDBLite consensus disorder prediction 127 182 - -
Gabi593g00014 782 Coils Coil 303 330 - -
Gabi593g00014 782 Pfam Domain of unknown function (DUF3444) 497 703 IPR024593 -
Gabi593g00014 782 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gabi593g00014 782 CDD DnaJ 66 119 IPR001623 -
Gabi593g00014 782 MobiDBLite consensus disorder prediction 313 331 - -
Gabi593g00014 782 MobiDBLite consensus disorder prediction 141 173 - -
Gabi593g00014 782 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi593g00014 Gabi-Chr593 154318 159774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi593g00014 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.468 8.76e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi593g00014 - - gmx:100816712 1134.01