Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi593g00007 ATGGATTGGGTTCGCGGAAACACGCTTGGACGGGGAAGCTTTGCCACCGTCAATCTGGCCATACCCACAAACCGTTCCACTCAGTTTTCTTCTCCCACCGCCGTCAAATCCTCCTCCTCCGATGATGTTTTCGCCTCGTATTTGCTCAAGAACGAGAAAGAGATACTCGACCACCTAGGGTATTGCCCGCACATCGTTAAGTGTTACGGCCATGATTATACCTTTGAAAACGGTGGAGAGTACTATAATCTGTTTCTCGAATACGCTGCCGGTGGTACCCTCGCTGATCAGCTCAAGAATCACGGTGGGGGGTTCCCGGAATCCCGTGTTCGACGATACACGAGATCCATCATCGAAGGTCTCAACCATATTCACGCCAAGGGTTTTGTCCACTGCGATATAAAGCTACAAAACATTCTAGTTTTCGTCGACAATGATACTATCAAGATTGCGGACTTTGGTCTTGCAAAGGAGACAGGGAAGGAAGAACAGAGTCAAACAACAACGTGGGCAGGGGATGAGTGCAGGGGAACTCCTATGTTTATGTCGCCGGAGTCACTGAACAACAACGAGTGCGAGTCTCCGGCGGATATATGGGCTCTGGGCTGCGCCGTGGTGGAGATGGTTACCGGAAAACCCGCTTGGAATGTGGGCAGCGGATCGAATGATATCTGGCAATTGCTGTTTCGAATTGGGGTGGGTGAAGAATTGCCGCATGTTCCAGATGAATTGTCCCAACAAGGGAAGGATTTTCTTGGCAAGTGTTTTGTTAGGGATCCCAAGAAGAGATGGACGGCTGAGATGCTTTTGAAACATCCCTTTGTGGTTGTGGCTGATGATGATGATGATGATGACATTGTTCCAACATTCAAGCACGTGCACCCATCTCCAAGGTCTAACTTCGATTTCCCTCATTGTCCTTTCACTACTGGTTCGTCGTCCTGTTTGCCAAGTTTATGTTCGCCGGCGGATCGGCTCCGGCGGCTGGTCACCGATCAGAGACCAATTGGTTGGTCAGAAACGGATGGGTGGACTAGTGTGAGGGGAGGTTATTAG 1056 0.5 MDWVRGNTLGRGSFATVNLAIPTNRSTQFSSPTAVKSSSSDDVFASYLLKNEKEILDHLGYCPHIVKCYGHDYTFENGGEYYNLFLEYAAGGTLADQLKNHGGGFPESRVRRYTRSIIEGLNHIHAKGFVHCDIKLQNILVFVDNDTIKIADFGLAKETGKEEQSQTTTWAGDECRGTPMFMSPESLNNNECESPADIWALGCAVVEMVTGKPAWNVGSGSNDIWQLLFRIGVGEELPHVPDELSQQGKDFLGKCFVRDPKKRWTAEMLLKHPFVVVADDDDDDDIVPTFKHVHPSPRSNFDFPHCPFTTGSSSCLPSLCSPADRLRRLVTDQRPIGWSETDGWTSVRGGY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi593g00007 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Gabi593g00007 351 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 294 - -
Gabi593g00007 351 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi593g00007 351 Gene3D Transferase(Phosphotransferase) domain 1 2 298 - -
Gabi593g00007 351 CDD STKc_MAPKKK 2 275 - -
Gabi593g00007 351 SUPERFAMILY Protein kinase-like (PK-like) 2 297 IPR011009 -
Gabi593g00007 351 ProSiteProfiles Protein kinase domain profile. 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi593g00007 351 Pfam Protein kinase domain 5 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi593g00007 351 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi593g00007 Gabi-Chr593 58156 59250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi593g00007 1 348 MAP Kinase Kinase Kinase AT5G67080 51.955 3.52e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi593g00007 Pkinase 4.5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi593g00007 - - aprc:113869133 443.351