Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi592g00010 ATGGAGAAAGTACCTGGGATTGAAGAATCTTCTGAGTCACCAGCTTTATCTCCACCACCTCCTGATTTGCCTCCCAATATGGAAACAGAACAAACAGCTCATGCAAATTATTCTATTATCAGTAGGCAGGGGGTTGGAAGCACAGGAATACGCAAACCATTGCTTGCAAATCTCTTCAAAGTTTCTGTTAATGCCCCAGATGCAATATTTTTCCAGTATAGTGTTACTATTGCTTCTGAAGATAAAAGAGCCATTGAAAGCAAGGGCATTGGGAGAAAACTGATTGATAAGCTTTACCAAACATACTCTTCTGAACTTGGTGGCAAAAGGTATGCTTATGATGGAGATAGAACTTTGTACACAGTGGGTCCTCTGCCATCTAATAAGTTTGAGTTCGAAGTATTGCTTGAGGAATCATTTGCAAAGCATAGTGCTGAGAATCCTGGTGCTAATGGAAGCCCTCGTAAGGAAACTAAAAGGTCAAAACATTCTTTTCAGTCAAAGATATTCATGGTGGAAATAAGTTTTGCTGCTAAAATACCCCTGCAGTCCATTGCTCTTGCCCTCAAAGGGGTTGAGTCAAATACTAATTCTCAGGATGCCTTGAGAGTACTTGATATCGTACTGAGGCAGCAAGCAGCTAACAGAGGGTGTCTCTTGGTAAGGCAATCTTTTTTTCATGATGACTTGAGGAATTTCACCGATGTTGGAGGTGGAGTAACAGGAGTTCAGGGTTTTCATTCCAGTTTTCGTCCCACACAGGGAGGATTGTCTCTCAATATGGATGTGTCCACTACGATTATCTTAAAACCTGGACCTGTAATTGATTTTCTCCTATCCAACCAGAATGTGAAGGAAGCCCGTTATATAGACTGGGCAAAGGCCAAAAAAATGCTAAAAAATTTAAGGGTGCGGGCAACACATCGTAACCAGGAATTTAAAATTTCTGGCTTGAGTGAGAAGCCCTGCATTCAGCAACTTTTTAGTATGAAGGTGAGAAATGTTGACAACAATAATGGAGTGGAGACAGTGGATATTACTGTGTATGAGTATTTTGCAAAACACTGTGGCATCCAGCTGAACTCTTCTGCTTATCTTCCATGTCTTGATGTTGGGAAACCAAAACGGCCTAACTATCTACCCCTGGAGCTATCTTCACTTGTTTCCCTCCAGCGGTATACAAAGGCATTATCTCCAACGCAAAGAGCATCTTTAGTAGAAAAATCACGCCAAAAGCCTCAAGAAAGAATTAAAATTCTGATGAATGCTGTAGGAAATTATTGCAACCATGATGATCCTATTCTTGCTGCATGTGGCATTTCTATTGAGAAACAATTGACTCAGGTTGAAGGTCGAGTTCTTGAGGCACCAAAGTTGATGGTTGGTAAGAATGAAGACTGCCTCCCCTATAGCGGAAGGTGGAACTTTAATAAAAAGACACTTCTTAAACCATCACATATTAATGTCTGGGCTGTTGTCAACTTTTCTGCTCGTTGGGATACTAGTTACATATCAAGGGAGCTGATTAAATGTGGAATGAGCAAGGGCATAAACATTGGACGACCATACTCGTTAATAGAGGAAGAATCGACTTACAGAAAATCTAACCCTATTGCAAGGGTTGAAAAAATGTTTGAGCTGCTTAAATCAAGGCTTAACAAAGAACCAGAGCTTATTCTCTGTGTCCTGCCAGAGAGGAAGCACTGTGACATTTATGGGCCCTGGAAAAAGAAGTGTCTGAGTGAATTTGGTGTTGTCACACAGTGCATCGCCCCTCTCAAGATCACTGATCAATACCTTACTAATGTACTTCTTAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGCTGAAAATGGAGCATTCTGGGCATCTTCCCCCGATTAAAGATGTTGCAACAATGATTTTGGGGATGGATGTCTCTCACGGTTCCCCTGGTCGGTCAGATATTCCATCAATAGCAGCGGTTGTTGGATCTCGATGTTGGCCACTGATTTCAAGGTATAGAGCATCCGTGAGAACACAGTCATCTAAAGTGGAGATGATTGATGCTCTATACAAGCCTTTGGATAATGGAAATGATGATGGTATTATCAGAGAATTGCTTCTAGATTTCTATGATTCAAGTAATGGATGCAAACCAGATCAAATTATTGTCTTCAGGGATGGAGTTAGTGAATCGCAATTTGAACAGGTTTTGAATATTGAGCTTAACCAGATAATAAAGGCCTATCAACATCTTGGGGAGGTTAATGTTCCCAAGTTCACTGTAATTGTGGCACAGAAGAATCATCATACGAAGCTGTTTCTAGATAATGATATGAAAAATGTTCCTCCAGGGACGGTCGTTGACACAAAAATTGTGCATCCAAGAAATTATGATTTCTACATGTGTTCTCATGCAGGGATCATTGGAACATCTAGGCCTGTGCATTATCATGTGTTGCTTGATGAGATTGGTTTCTCCGCAGATGGCTTGCAAAATATGATCCATTCGTTATGTTATGTGAACCAAAGGAGCACAACTGCAACCTCAATTGTGGCACCTATTTGCTATGCTCACCTTGCTGCAGCTCAAATGGGGCAATTTTTGAATTTTGATGATTTATCAGAAACATCTTCAAGTCTTACTTCAGAGGGAAACGTTCCCATACCAGAGCTTCCAAGGTTGCCTAAGAGTGTCAGGAGTAGCATGTTCTTCTGTTGA 2709 0.4075 MEKVPGIEESSESPALSPPPPDLPPNMETEQTAHANYSIISRQGVGSTGIRKPLLANLFKVSVNAPDAIFFQYSVTIASEDKRAIESKGIGRKLIDKLYQTYSSELGGKRYAYDGDRTLYTVGPLPSNKFEFEVLLEESFAKHSAENPGANGSPRKETKRSKHSFQSKIFMVEISFAAKIPLQSIALALKGVESNTNSQDALRVLDIVLRQQAANRGCLLVRQSFFHDDLRNFTDVGGGVTGVQGFHSSFRPTQGGLSLNMDVSTTIILKPGPVIDFLLSNQNVKEARYIDWAKAKKMLKNLRVRATHRNQEFKISGLSEKPCIQQLFSMKVRNVDNNNGVETVDITVYEYFAKHCGIQLNSSAYLPCLDVGKPKRPNYLPLELSSLVSLQRYTKALSPTQRASLVEKSRQKPQERIKILMNAVGNYCNHDDPILAACGISIEKQLTQVEGRVLEAPKLMVGKNEDCLPYSGRWNFNKKTLLKPSHINVWAVVNFSARWDTSYISRELIKCGMSKGINIGRPYSLIEEESTYRKSNPIARVEKMFELLKSRLNKEPELILCVLPERKHCDIYGPWKKKCLSEFGVVTQCIAPLKITDQYLTNVLLKINSKLGGINSLLKMEHSGHLPPIKDVATMILGMDVSHGSPGRSDIPSIAAVVGSRCWPLISRYRASVRTQSSKVEMIDALYKPLDNGNDDGIIRELLLDFYDSSNGCKPDQIIVFRDGVSESQFEQVLNIELNQIIKAYQHLGEVNVPKFTVIVAQKNHHTKLFLDNDMKNVPPGTVVDTKIVHPRNYDFYMCSHAGIIGTSRPVHYHVLLDEIGFSADGLQNMIHSLCYVNQRSTTATSIVAPICYAHLAAAQMGQFLNFDDLSETSSSLTSEGNVPIPELPRLPKSVRSSMFFC 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi592g00010 902 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 35 868 - -
Gabi592g00010 902 MobiDBLite consensus disorder prediction 1 29 - -
Gabi592g00010 902 Pfam PAZ domain 275 405 IPR003100 GO:0005515
Gabi592g00010 902 SUPERFAMILY Ribonuclease H-like 542 866 IPR012337 -
Gabi592g00010 902 SMART DUF1785_2 219 271 IPR014811 -
Gabi592g00010 902 ProSiteProfiles Piwi domain profile. 558 866 IPR003165 GO:0003676
Gabi592g00010 902 Gene3D - 626 902 IPR036397 GO:0003676
Gabi592g00010 902 Pfam Argonaute linker 1 domain 221 268 IPR014811 -
Gabi592g00010 902 CDD Piwi_ago-like 433 860 IPR045246 -
Gabi592g00010 902 FunFam Protein argonaute 3 626 902 - -
Gabi592g00010 902 Gene3D paz domain 265 393 - -
Gabi592g00010 902 Gene3D - 453 619 - -
Gabi592g00010 902 SUPERFAMILY PAZ domain 266 426 IPR036085 GO:0005515
Gabi592g00010 902 FunFam Protein argonaute 7 266 393 - -
Gabi592g00010 902 CDD PAZ_argonaute_like 271 388 - -
Gabi592g00010 902 SMART Piwi_a_2 558 866 IPR003165 GO:0003676
Gabi592g00010 902 Pfam Piwi domain 558 865 IPR003165 GO:0003676
Gabi592g00010 902 Pfam Argonaute linker 2 domain 416 460 IPR032472 -
Gabi592g00010 902 ProSiteProfiles PAZ domain profile. 296 389 IPR003100 GO:0005515
Gabi592g00010 902 Pfam N-terminal domain of argonaute 53 209 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi592g00010 Gabi-Chr592 144146 151026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi592g00010 26 902 Eukaryotic Initiation Factors Gene Family AT5G43810 36.265 2.18e-165 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi592g00010 K11593 - gmx:100778875 1422.53