Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi591g00012 ATGACCACCACGACAAGTATTGGCGGCGGAACCGGCGGCGGAGGAGACGACCGGGTTCTCGCTACCGCTCAACAGATCTTGAAGAGTCTTAATACTGCCAAAGAGGATCGCCAAGACATGCTTTTAATCTTTTCCTCCTTCGACAACCGCCTCTCGGGCATTTCTGACCTCGTCAACGGCGAGGATTCAAAATCCTCTTCCGATGAAGACCTTGACCGATTCGAAGCAGCGGAGAAGGTCATTCTTGCAGATGCATCCCACTCTGGTGAACCTTCCCGCCAATCCACCTCGCTCTTCGATCCTCCGAATGGCCCCGTCGAGTACTTATCCGCCGTCGACGAGATCATCCTGTGGATGGAACAATTCTCGATCGCGCCGCCGCCGCCGCCGTCGTCGAGCGGGAGAATCCGCCAGGTCACAGTGGACCGCGCTGAGAACGCGATCCAGCTCGCGATGTCGAGGCTTGAGGAGGAGTTGCGCCACGTGTTGATTTGCAACACCATCCCTCTCGACGCCGTGAGCAGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCGCTTCGCACGACTGCGCAATCGACGAGAATCTAGGAAGCTTCGGCGAGGTCAGCGATCGAGGTTCTCATCGGTTTCACGAGCGTGGTGCGAGCTTGGGAGATGACGATTTGTTCGTGGATTTGGTGCGTCCTGATGCGGTGCCTGACCTCAGAGAGATCATCGATCGAATGGTTAGGTCTGGTTACGAAAGGGAGTGCCTTCAGGTTTATAGCAGTGTCCGTCGTGACGCTTTGGATGAGTGTTTGGCTACTCTTGGTGTTGAGAGGCTTAGTATTGAAGAGGTTCAGAAGGTTGAATGGAAGAGTTTGGATGAGAAAATGAAGAATTGGGTGCAAGCTGCTAAGGTTGTTGTTGGGGTGCTGTTGAGTGGCGAGAAGAGGCTGTGCGATACTCTGTTTGGTGATTTGGATGAGTTCAAGGAGATTTGTTTCAATGAGACTGCTAAAGGGTGTGTTATGCAGTTGTTGAATTTTGGTGAGGCCATTTCAATTTGTAAGAGGTCGCCGGAGAAGTTGTTTAGGATATTGGATATGTACGAGGCTTTGAGGGATGCTTTGCCTGATTTGCAGGCTATGGTTTCGGATGAGCTTGTGATCAGTGAAGCCAAAGGAGTGTTGAGTGGACTTGGTGAGGCTGCCAAAGGGACATTTGCTGAGTTTGAGAATTGTATTCGGAATGAGACTTCCAAAAAGCCAGTAGTAACTGGGGATGTTCATCCTTTGCCTCGTTATGTCATGAATTACCTCAAATTGCTTGTGGATTATGGTGACCCTATGGATTCACTTTTGGAAATCACTGAAGAGGATCTTTACCGTTTTCAGAATGATTTTGGTGGTGATGGTTCCCAGTTGGAGGCCATGTCCCCCTTAGGACGTCAAATTTTGTTGTTGATGTCTGAGCTTGAGTATAATCTTGTGGAAAAATCAAGACTTTATGAAGACAGTGCAATGCAACAGATATTTTTGATGAACAATCTCTATTACCTAGTGCGGAAAGTGAAAGATTCAGATCTTGGGAAGGTCTTGGGAGATGATTGGATTCGTAAACGCCGTGGTCAGATTCGCCAGTATGCTACAGGCTATCTCAGAGCCTGTTGGAGCAAGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAGTAATGCCTCAAAGATGGCTTTGAAGGAAAGGTTCAAGAGTTTCAACGCATGTTTTGAAGAAATATATAGGATTCAGACAGCTTGGAAGGTACCAGATGATCAGCTTCGAGAAGAGCTGCGAATATCTATATCGGAGAAGGTGCTTCCTGCATACCGGGCATTCATGGGGCGGTTTGGTAGTCAGCTGGAGGGAAGGCATGCGGGGAAATACATTAAGTACACACCAGACGATCTAGAGACCTATTTGTCAGATTTGTTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGAAAAAGTACATAG 2013 0.4873 MTTTTSIGGGTGGGGDDRVLATAQQILKSLNTAKEDRQDMLLIFSSFDNRLSGISDLVNGEDSKSSSDEDLDRFEAAEKVILADASHSGEPSRQSTSLFDPPNGPVEYLSAVDEIILWMEQFSIAPPPPPSSSGRIRQVTVDRAENAIQLAMSRLEEELRHVLICNTIPLDAVSSYGSIRRVSLSFASHDCAIDENLGSFGEVSDRGSHRFHERGASLGDDDLFVDLVRPDAVPDLREIIDRMVRSGYERECLQVYSSVRRDALDECLATLGVERLSIEEVQKVEWKSLDEKMKNWVQAAKVVVGVLLSGEKRLCDTLFGDLDEFKEICFNETAKGCVMQLLNFGEAISICKRSPEKLFRILDMYEALRDALPDLQAMVSDELVISEAKGVLSGLGEAAKGTFAEFENCIRNETSKKPVVTGDVHPLPRYVMNYLKLLVDYGDPMDSLLEITEEDLYRFQNDFGGDGSQLEAMSPLGRQILLLMSELEYNLVEKSRLYEDSAMQQIFLMNNLYYLVRKVKDSDLGKVLGDDWIRKRRGQIRQYATGYLRACWSKALSCLKDEGIGGSSSNASKMALKERFKSFNACFEEIYRIQTAWKVPDDQLREELRISISEKVLPAYRAFMGRFGSQLEGRHAGKYIKYTPDDLETYLSDLFEGSPAVLHHIRRKST 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi591g00012 670 Gene3D Exocyst complex component Exo70 95 662 - -
Gabi591g00012 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 69 657 IPR004140 GO:0000145|GO:0006887
Gabi591g00012 670 Coils Coil 141 161 - -
Gabi591g00012 670 Pfam Exo70 exocyst complex subunit 294 653 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi591g00012 670 SUPERFAMILY Cullin repeat-like 102 656 IPR016159 -
Gabi591g00012 670 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi591g00012 Gabi-Chr591 110967 113711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi591g00012 17 669 EXO70 exocyst subunit family AT5G50380 60.088 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi591g00012 K07195 - gmx:100818693 1134.01