Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi591g00007 ATGGTTTCAACGAGACGCAGTGGATCTCTTTCTGCAAACAATACAAAAAGATCTTCCTCCTCAGAAGATAAGCCTCCTTCACCTAAACGTCAAAAGGTTGACAATGGCGTTTCGTCGGAGAAACCGGCGCCGGTGGCGGATAATTCCAAGAAAACATGTACTCCGGAGCCTGTCCCTGATCCCGGAGAATGTGGCTCCCGCGATGCTCAGATCGCCGGAGCGGGTGCCGCTGATGGTGTGAGTTCCGGCAAGGGCGATGCTACGCCTGCTGTGGCTGTGGCGGTGCCGATTGCTGATGCCACATGTCCGTCGTTTTCTTCATGGAGTATATATCAGAAACAACCCTGGTGCAGGTTCTTGACGCAGTCTGCACAGAATCCAAATGTTCATGTTTGCACTCCGAATTTCACAATTGGTTCTAGTAGAAATTGCAACTTGGCACTGAATGATCAAACTATAAGTGGGAATTTATGTAAGATCAAGCATACCCAGAGCGGGGGATGTGCTGTAGCTGTGCTAGAAAGTACGGGCAGCAAAGGATCTGTGCTAGTAAATGGGACGCTTGTCAAGAAGAATACCAGCTGTGTGCTTAACTCGGGTGATGAGGTGGTTTTTGGCTCGCTGGGAAATCATTCTTATATTTTCCAGCAACTGAATACTGAGGTTGCAGTTAGGGGTGCAGAAGTTCAGAGTGGTGATGGGAAAATTCTGCAGTTTGAAAGGAGAAGTGGAGACCCTTCAGCTGTGGCTGGGGCCTCTATTTTGGCTTCTCTTTCTAACCTCAGACAGGACCTTACCCAACGGAAATCACCATCTCAGACCTCCAGTAAACCTCACCAAGGTGCTGATGTCTCTAGTCATTCTGTTCTTCATGATGATACAGAAATTGAGCTTGATGGCTCAGAATCAGCTCCAAATATACGGAGTGATAAAGGAGGTGATGTTGGAGCAAGCGACAAGAATTCAACAATGGATTGCGACCTAGATGCTGGCACAGAGGCAGGCAATGTAAAATTTTATGGGGTATTGGAAGAAAGAAATGGGACACGGGATACGCGAGCCGCATCGTCTTCAGGTACATCTGTGCGCTGTGCAGTGTTTAAAGAAGATGTTCGTGCTGCAATACTGGATGGAAAAGAAATGGATGTGTCTTTTGACAACTTCCCATACTATTTAAGTGAGAATACAAAAAATGTCCTGGTGGCAGCTTGCTTGTTACACCTCAGGCATAAAGGACATGAAAAATACACCGGAGATCTTACAACCATAAACCCTCGTATTTTACTCTCAGGACCTGCAGGGTCAGAGATATATCAGGAGATGTTGGCAAAAGCACTTGCAAAATACTTTGGAGCTAAGTTGCTCATATTTGATAGCCATTTGCTTTTGGGTGGTTTATCTTCCAAGGAATCTGAGCTACTCAAAGATGGATTTAATGCTGAAAAATCTTGCAGCTACCCCAAACGAAGTCCTACAACTACTAACTTGGCTAGGGCCATGGACCCGTTAGCTAGTGAAACAGAAACACATAGCTCTTTAAATGCACCTGCATCATATGGCCACGAGTCTCAACCTAAGTTGGAAACTGATAACATACCATCTACCTCTGGAACAGCTAAAAATTGCTTGTTTAAATTAGGTGATAGGGTTAAATTTAGCTGTTCATCATCTTGTGGCTTGTACCAAACATCTTCAAGGGGTCCACCTAGTGGAAGTCGGGGGAAGGTTGTCTTACTATTTGATGATAATCCATTGTCTAAAATTGGTGTGAGATTTGATAAACCGATACCTGATGGAGTTGATCTTGGAGGGGCCTGTGAGGGAGGTCAAGGATTTTTCTGCAATGTCACTGATCTTCGATTGGAAAACAGTGGTGTGGAAGAACTGGACAAATTACTTATTAATTTGTTGTTTGAGGTTGTTTTTAGCGAGAGCAGAAGCTCACCGTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTATAGTTGGAAATGGAGATCCAGTTTCATTTAAAAGTAGGCTTGAAAAGCTTCCAGACAGTGTGGTGGTAATAGGTTCACACACTCATACTGACAGTCGAAAGGAGAAGTCGCACCCTGGTGGTTTGCTATTTACAAAATTCGGTAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGACGATTGCATGACAGGGGGAAGGAAGTCCCAAAGCCAAACAAAACTTTAACTAAGCTTTTCCCAAATAAAATTACAATCCACATGCCCCAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATGTTGAGACTCTTAAAATACAAGGAAATTTACATCACTTGCGCATGGTTTTGGGCCGTTGTGGAATGGAATGTGAAGGACTTGAGACCTTGTGCATTAAGGATCAGACACTTACAAATGAAATTTCAGAGAAGATAGTTGGGTGGGCTTTAAGCCACCACCTCATGCAGAATTCTGAAGCTGATCCTGATTCAAAACTTGTATTGTCGAGTGAGAGCATCCAGTATGGAATTGGAATCTTGCAGTCTATCCAGAATGAGTCCAAGAGTCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAGTGACATTGATGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACACTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTGTTTTGCAAGGGGCAATTAACCAAGCCATGCAAGGGTATCCTATTGTTTGGTCCCCCTGGAACAGGTAAAACAATGCTTGCAAAAGCAATTGCTACCGAAGCAGGTGCAAACTTCATCAACATTTCCATGTCAAGCATTACGTCTAAGTGGTTTGGTGAGGGTGAGAAATACGTGAAAGCTGTTTTCTCTCTGGCGAGTAAAATTGCTCCTAGTGTTATATTCGTTGACGAAGTTGACAGCATGTTGGGTCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGGACAAAGGATACTGAGCGAGTTCTTGTGCTTGCAGCCACTAACAGGCCTTTTGACCTAGATGAAGCTGTTGTAAGGAGGCTGCCCCGAAGATTGATGGTGAATTTGCCAGATGCTCCTAATAGAGGAAAAATATTGAAAGTCATACTGGCAAAGGAGGAATTGTCTTGTGATGTTGATTTGGATGCAGTTGCAAGCATGACTGATGGATATTCTGGAAGTGATCTTAAGAATTTGTGTGTAACTGCTGCACACCGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACGTGTTCTTGCTCTAGCAGAAGGTCGACCTGCTCCAGCATTATGTGGCAGTGGGGACATCCGATCTTTAAACATGGAAGACTTTAAATATGCTCATCAACAGGTATGTGCAAGTGTTTCCTCTGAATCAGTAAATATGACTGAGCTTTTACAGTGGAACGAACTATATGGCGAAGGTGGTTCAAGAATAAAGAAAGCACTCAGCTACTTCATGTGA 3582 0.4375 MVSTRRSGSLSANNTKRSSSSEDKPPSPKRQKVDNGVSSEKPAPVADNSKKTCTPEPVPDPGECGSRDAQIAGAGAADGVSSGKGDATPAVAVAVPIADATCPSFSSWSIYQKQPWCRFLTQSAQNPNVHVCTPNFTIGSSRNCNLALNDQTISGNLCKIKHTQSGGCAVAVLESTGSKGSVLVNGTLVKKNTSCVLNSGDEVVFGSLGNHSYIFQQLNTEVAVRGAEVQSGDGKILQFERRSGDPSAVAGASILASLSNLRQDLTQRKSPSQTSSKPHQGADVSSHSVLHDDTEIELDGSESAPNIRSDKGGDVGASDKNSTMDCDLDAGTEAGNVKFYGVLEERNGTRDTRAASSSGTSVRCAVFKEDVRAAILDGKEMDVSFDNFPYYLSENTKNVLVAACLLHLRHKGHEKYTGDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLLLGGLSSKESELLKDGFNAEKSCSYPKRSPTTTNLARAMDPLASETETHSSLNAPASYGHESQPKLETDNIPSTSGTAKNCLFKLGDRVKFSCSSSCGLYQTSSRGPPSGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVTDLRLENSGVEELDKLLINLLFEVVFSESRSSPFILFMKDAEKSIVGNGDPVSFKSRLEKLPDSVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKITIHMPQDEALLASWKQQLDRDVETLKIQGNLHHLRMVLGRCGMECEGLETLCIKDQTLTNEISEKIVGWALSHHLMQNSEADPDSKLVLSSESIQYGIGILQSIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIDVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNRGKILKVILAKEELSCDVDLDAVASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERVLALAEGRPAPALCGSGDIRSLNMEDFKYAHQQVCASVSSESVNMTELLQWNELYGEGGSRIKKALSYFM 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi591g00007 1193 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 367 1192 - -
Gabi591g00007 1193 MobiDBLite consensus disorder prediction 1 69 - -
Gabi591g00007 1193 MobiDBLite consensus disorder prediction 264 328 - -
Gabi591g00007 1193 Coils Coil 849 869 - -
Gabi591g00007 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 887 1169 IPR027417 -
Gabi591g00007 1193 Gene3D - 1061 1155 - -
Gabi591g00007 1193 MobiDBLite consensus disorder prediction 22 36 - -
Gabi591g00007 1193 Pfam AAA+ lid domain 1082 1117 IPR041569 -
Gabi591g00007 1193 SMART AAA_5 925 1062 IPR003593 GO:0016887
Gabi591g00007 1193 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 887 1062 - -
Gabi591g00007 1193 Pfam ATPase family associated with various cellular activities (AAA) 929 1058 IPR003959 GO:0005524|GO:0016887
Gabi591g00007 1193 MobiDBLite consensus disorder prediction 1 21 - -
Gabi591g00007 1193 Gene3D - 115 224 - -
Gabi591g00007 1193 CDD RecA-like_ATAD1 892 1058 - -
Gabi591g00007 1193 CDD FHA 118 216 - -
Gabi591g00007 1193 MobiDBLite consensus disorder prediction 264 283 - -
Gabi591g00007 1193 MobiDBLite consensus disorder prediction 503 533 - -
Gabi591g00007 1193 ProSitePatterns AAA-protein family signature. 1032 1051 IPR003960 GO:0005524|GO:0016887
Gabi591g00007 1193 Gene3D - 887 1168 IPR027417 -
Gabi591g00007 1193 SUPERFAMILY SMAD/FHA domain 101 215 IPR008984 GO:0005515
Gabi591g00007 1193 Pfam FHA domain 137 206 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi591g00007 Gabi-Chr591 29231 57270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi591g00007 924 1130 Calmodulin-binding Proteins AT3G56690 36.019 1.20e-30 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi591g00007 - - gmx:100790427 1984.53