Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi591g00002 ATGGACGTCGTAGTAGAGATTCTCTCCGGTGCGCACTTCTCCGGTTGGCATCCTTCAACGACGTCGTCTTTTTCTCCAACTCCCTCCCATCACCCCTTCGTAATTGGGGTCGCTGGAGGTACGGCATCGGGGAAGACCACAGTGTGTGACATGATCGTTCAACAATTGCAAGATCACAGAGTTGTGCTCGTTAATCAGGATTCATTCTACCGTGGTTTGACAAACGAGGAGTTGAAACATGTTCATGAGTATAATTTTGATCATCCTGATGCATTTGATACAGAGCAACTTTTTGAAACCCTCAGCAAGCTCAAATCTGGACAGTCAGTTCAGGTTCCTATATATGATTTTAAACTCCATCAGAGATCCCCTGACAGATCCCGACAGGTCAATGCATCTGAAGTAATCATTTTAGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGGATGTGAAGATCTTTGTTGATGCAGATCCGGATGTAAGGCTTGCTCGCAGAATTAGACGTGATACTGTTGAGAGGGGTAGAGACGTACACTCTGTACTGGAACAGTATTCAAAATTTGTTAAACCTGCCTTCGACGATTTTATTCTTCCATCCAAAAAATATGCCGACATCATAATACCACGTGGGGGAGAGAATCACGTAGCTATTGATTTGATTGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAGATATATCCAAATTTGAATGTTATACAGTCTACCTTCCAGACTAGAGGCATGCACACTCTTATTCGTGACAGGGAAATATCAAAGCATGACTTTGTTTTTTATTCAGATCGGCTACTTCGTTTGGTAGTGGAACATGGTCTTGGTTACTTGCCATTTACAGAGAAACAAGTTATCACACCCACAGGATCAATTTATGGTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCTGTTATTCGAAGTGGCGAAAGCATGGAAAATGCTTTGCGTGCATGCTGTAAAGGGATAAAAATTGGAAAAATTCTCATCCATCATGAAGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCAAAAGATATTGCAGATAGACATGTTCTTCTCATGGATCCAGTACTTGGTACAGGTAACTCTGCTAGCCAAGCAATTGACCTTCTGATAAAGAAGGGAGTTCCAGATTCTCGGATAATATTCCTCAACCTCATATCTGCTCCTGAGGGAATACACTGTGTATGTAAACGTTTTCCGCACCTGAAAATTGTCACTTCGGAGATTGAAGAGGGACTAAATGACCAGTTCCGTGTCATACCAGGGTTAGGAGAATTTGGTGACCGCTATTTTGGTACAGACGACTCTTAG 1362 0.4214 MDVVVEILSGAHFSGWHPSTTSSFSPTPSHHPFVIGVAGGTASGKTTVCDMIVQQLQDHRVVLVNQDSFYRGLTNEELKHVHEYNFDHPDAFDTEQLFETLSKLKSGQSVQVPIYDFKLHQRSPDRSRQVNASEVIILEGILVFHEQRVRNMMDVKIFVDADPDVRLARRIRRDTVERGRDVHSVLEQYSKFVKPAFDDFILPSKKYADIIIPRGGENHVAIDLIVQHIRTKLGQHNLCKIYPNLNVIQSTFQTRGMHTLIRDREISKHDFVFYSDRLLRLVVEHGLGYLPFTEKQVITPTGSIYGGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHHEGDETQLIYEKLPKDIADRHVLLMDPVLGTGNSASQAIDLLIKKGVPDSRIIFLNLISAPEGIHCVCKRFPHLKIVTSEIEEGLNDQFRVIPGLGEFGDRYFGTDDS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi591g00002 453 Pfam Uracil phosphoribosyltransferase 250 450 - -
Gabi591g00002 453 PRINTS Uridine kinase signature 200 213 - -
Gabi591g00002 453 PRINTS Uridine kinase signature 107 122 - -
Gabi591g00002 453 PRINTS Uridine kinase signature 164 174 - -
Gabi591g00002 453 PRINTS Uridine kinase signature 62 73 - -
Gabi591g00002 453 PRINTS Uridine kinase signature 178 189 - -
Gabi591g00002 453 PRINTS Uridine kinase signature 32 49 - -
Gabi591g00002 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 225 IPR027417 -
Gabi591g00002 453 Gene3D - 29 235 IPR027417 -
Gabi591g00002 453 Gene3D - 236 450 IPR029057 -
Gabi591g00002 453 CDD UMPK 34 232 IPR000764 -
Gabi591g00002 453 CDD PRTases_typeI 309 423 IPR000836 -
Gabi591g00002 453 Pfam Phosphoribulokinase / Uridine kinase family 34 220 IPR006083 GO:0005524|GO:0016301
Gabi591g00002 453 FunFam Uridine kinase 236 450 - -
Gabi591g00002 453 FunFam Uridine kinase 29 235 - -
Gabi591g00002 453 PANTHER URIDINE KINASE 29 361 - -
Gabi591g00002 453 NCBIfam uridine kinase 33 232 IPR000764 -
Gabi591g00002 453 SUPERFAMILY PRTase-like 235 451 IPR029057 -
Gabi591g00002 453 ProSiteProfiles UvrC family, homology region profile. 120 221 IPR001162 GO:0009381
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi591g00002 Gabi-Chr591 6426 12360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi591g00002 1 452 PRT Gene Family AT3G27190 76.261 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi591g00002 K00876 - gmx:100816209 823.928