Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi591g00001 ATGGACGTCGTAGTAGAGATTCTCTCCGGTGCGCACTTCTCCGGTTGGCATCCTTCAACGACGTCGTCTTTTTCTCCAACTCCCTCCCATCACCCCTTCGTAATTGGGGTCGCTGGAGGTACGGCATCGGGGAAGACCACAGTGTGTGACATGATCGTTCAACAATTGCAAGATCACAGAGTTGTGCTCGTTAATCAGGATTCATTCTACCGTGGTTTGACAAACGAGGAGTTGAAACATGTTCATGAGTATAATTTTGATCATCCTGATGCATTTGATACAGAGCAACTTTTTGAAACCCTCAGCAAGCTCAAATCTGGACAGTCAGTTCAGGTTCCTATATATGATTTTAAACTCCATCAGAGATCCCCTGACAGATCCCGACAGGTCAATGCATCTGAAGTAATCATTTTAGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGGATGTGAAGATCTTTGTTGATGCAGATCCGGATGTAAGGCTTGCTCGCAGAATTAGACGTGATACTGTTGAGAGGGGTAGAGACGTACACTCTGTACTGGAACAGTATTCAAAATTTGTTAAACCTGCCTTCGACGATTTTATTCTTCCATCCAAAAAATATGCCGACATCATAATACCACGTGGGGGAGAGAATCACGTAGCTATTGATTTGATTGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAGATATATCCAAATTTGAATGTTATACAGTCTACCTTCCAGACTAGAGGCATGCACACTCTTATTCGTGACAGGGAAATATCAAAGCATGACTTTGTTTTTTATTCAGATCGGCTACTTCGTTTGGTAGTGGAACATGGTCTTGGTTACTTGCCATTTACAGAGAAACAAGTTATCACACCCACAGGATCAATTTATGGTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCTGTTATTCGAAGTGGCGAAAGCATGGAAAATGCTTTGCGTGCATGCTGTAAAGGGATAAAAATTGGAAAAATTCTCATCCATCATGAAGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCAAAAGATATTGCAGATAGACATGTTCTTCTCATGGATCCAGTACTTGGTACAGGTAACTCTGCTAGCCAAGCAATTGACCTTCTGATAAAGAAGGGAGTTCCAGATTCTCGGATAATATTCCTCAACCTCATATCTGTAAGTTATGCTCCTGAGGGAATACACTGTGTATGTAAACGTTTTCCGCACCTGAAAATTGTCACTTCGGAGATTGAAGAGGGACTAAATGACCAGTTCCGTGTCATACCAGGGTTAGGAGAATTTGGTGACCGCTATTTTGGTACAGACGACTCTTAG 1371 0.4201 MDVVVEILSGAHFSGWHPSTTSSFSPTPSHHPFVIGVAGGTASGKTTVCDMIVQQLQDHRVVLVNQDSFYRGLTNEELKHVHEYNFDHPDAFDTEQLFETLSKLKSGQSVQVPIYDFKLHQRSPDRSRQVNASEVIILEGILVFHEQRVRNMMDVKIFVDADPDVRLARRIRRDTVERGRDVHSVLEQYSKFVKPAFDDFILPSKKYADIIIPRGGENHVAIDLIVQHIRTKLGQHNLCKIYPNLNVIQSTFQTRGMHTLIRDREISKHDFVFYSDRLLRLVVEHGLGYLPFTEKQVITPTGSIYGGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHHEGDETQLIYEKLPKDIADRHVLLMDPVLGTGNSASQAIDLLIKKGVPDSRIIFLNLISVSYAPEGIHCVCKRFPHLKIVTSEIEEGLNDQFRVIPGLGEFGDRYFGTDDS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi591g00001 456 Pfam Phosphoribulokinase / Uridine kinase family 34 220 IPR006083 GO:0005524|GO:0016301
Gabi591g00001 456 PRINTS Uridine kinase signature 32 49 - -
Gabi591g00001 456 PRINTS Uridine kinase signature 200 213 - -
Gabi591g00001 456 PRINTS Uridine kinase signature 178 189 - -
Gabi591g00001 456 PRINTS Uridine kinase signature 164 174 - -
Gabi591g00001 456 PRINTS Uridine kinase signature 62 73 - -
Gabi591g00001 456 PRINTS Uridine kinase signature 107 122 - -
Gabi591g00001 456 NCBIfam uridine kinase 33 232 IPR000764 -
Gabi591g00001 456 CDD PRTases_typeI 309 405 IPR000836 -
Gabi591g00001 456 Gene3D - 29 235 IPR027417 -
Gabi591g00001 456 FunFam Uridine kinase 29 235 - -
Gabi591g00001 456 Pfam Uracil phosphoribosyltransferase 250 453 - -
Gabi591g00001 456 SUPERFAMILY PRTase-like 235 454 IPR029057 -
Gabi591g00001 456 CDD UMPK 34 232 IPR000764 -
Gabi591g00001 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 225 IPR027417 -
Gabi591g00001 456 FunFam Uridine kinase 236 453 - -
Gabi591g00001 456 Gene3D - 236 453 IPR029057 -
Gabi591g00001 456 PANTHER URIDINE KINASE 29 361 - -
Gabi591g00001 456 ProSiteProfiles UvrC family, homology region profile. 120 221 IPR001162 GO:0009381
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi591g00001 Gabi-Chr591 6426 12360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi591g00001 1 455 PRT Gene Family AT3G27190 75.783 0.0 735