Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00130 ATGGTTTATCTCGCCGAGTACGGCACAGTCGTTGGAATCAATCACCGGAGGCCAATTTCTACGATATCAATTATACCAAACGGCACCGTTTCAACGGGCTACGTCGTCGTATTTCTGTGTCGGAGTTGCAGAGAACATGGCTTCAGTAGCGCCTCTGAATCAGCTTGGACAGATTTTCCCGTAGAGAACGCGTACGAACTGTTAGGAGTGTCGGATACCAGCTCATTTGCTGAGATAAAAGCGTCGTTTCGCAAATTGGCCAAAGAAACTCACCCGGACCTCGCTGATTCAAGGAGCGATTCCACTGCATCTCGACGATTTGTGCAAATCCTAGCCGCCTACGAGATTCTTTCTGATTCTCAAAAGAGAGCCCATTATGACATGTACCTGTTGTCTCAGAAAAAGCTTATGCAAAAGCATTCTCGGCAGGGTTCAAAATTGCACATATACAAATCACAGGCTACTACGTTGAAGGAGATGGAAGTTGTTGAATGGTTGAAGTGGTACAGATTAGCTATAAATGATATTTTGTCAGAGAAGAAGGAGATGGTGGGAACAGGCTATTTTGATTTACTTGAGAGAGATTTTTATTCAGCTATTCATGCAGCATACTACGGCCCTGAAATTGATTCTATGCCCATGGAGCTTCTTCCTGACTGCTTTGAGGCTGAGGAGAGGTCCTCTTACGAAACTCATGAGGTTTTGCACTTGGTTTCAGGCCGTGATCTTTTTGGGATGGTATGCCTAGTGAACAAGATTCCTGAGATATCATCTAGCAATATTGAAACTTTAACTTCTTTTAGATCCTTCCATTCAGGCTTGTGTCCATCCACAACAAATGTGAACATCCACAGGAATACTGAAAGCCCAGATGATTTTGGAACTCATCAAGGTCATAGCTCTAAAATTTCATGTAATGTATCAGATGCATATAGAGATCTAGAATTGCATGTCTCTGGGAGAGTGGTTGCTACAGCATCTAGGGTCCTACCTAGATGCTATTCTGGTGCGTTGCAGAAAGAAGATGATGTAGATCACATTCATGTGTTCCTTAATTCAGACGAAGATCCCAAACATACCAGTAGTGTCTTTTCCAAAAATTGCTCTGCAAATGGTGCAGTTGGAAGCAGAATTCATTTGGGAACCATATCTGGACTTGGAAGCAGTCCAGACGAAGGTTGTTGTTATGTCTACAATAACAGTGGTGCAAAGACCCATGTTATTATGAAACATAGAACGTTGATGGTGAAGCATATGCACTGGTATGAAGTGGGTGAGAAAGTTTCAGTTTGTGAGTGTAGATGCACTAGAGCTCGTTTGCCGCCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAATGGTCATACTATGCCATCACAAAGGTTCTGGGATGGCTTGGATTATAGTGAGGAAGCTGACAGTTCTGCAAACTGCAGAAGACTTCATCCAGCAATGTATCTGTTTGGTCTTGCTTATCGGACACTTGATCTTGAATATGCCAAAGCTAGCAAGAAAACATTTAAGAATGGTTTTGGAGCTCAAATGTTCCGAATTCTTCACTGGTGCAGGAAACTTGTGCAATAG 1635 0.4275 MVYLAEYGTVVGINHRRPISTISIIPNGTVSTGYVVVFLCRSCREHGFSSASESAWTDFPVENAYELLGVSDTSSFAEIKASFRKLAKETHPDLADSRSDSTASRRFVQILAAYEILSDSQKRAHYDMYLLSQKKLMQKHSRQGSKLHIYKSQATTLKEMEVVEWLKWYRLAINDILSEKKEMVGTGYFDLLERDFYSAIHAAYYGPEIDSMPMELLPDCFEAEERSSYETHEVLHLVSGRDLFGMVCLVNKIPEISSSNIETLTSFRSFHSGLCPSTTNVNIHRNTESPDDFGTHQGHSSKISCNVSDAYRDLELHVSGRVVATASRVLPRCYSGALQKEDDVDHIHVFLNSDEDPKHTSSVFSKNCSANGAVGSRIHLGTISGLGSSPDEGCCYVYNNSGAKTHVIMKHRTLMVKHMHWYEVGEKVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDKNGHTMPSQRFWDGLDYSEEADSSANCRRLHPAMYLFGLAYRTLDLEYAKASKKTFKNGFGAQMFRILHWCRKLVQ 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00130 544 Pfam DnaJ domain 63 127 IPR001623 -
Gabi588g00130 544 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 543 - -
Gabi588g00130 544 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Gabi588g00130 544 Gene3D DnaJ domain 54 152 IPR036869 -
Gabi588g00130 544 CDD DnaJ 63 119 IPR001623 -
Gabi588g00130 544 SMART dnaj_3 62 122 IPR001623 -
Gabi588g00130 544 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gabi588g00130 544 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Gabi588g00130 544 PRINTS DnaJ domain signature 65 83 IPR001623 -
Gabi588g00130 544 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gabi588g00130 544 PRINTS DnaJ domain signature 83 98 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00130 Gabi-Chr588 1664217 1668532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00130 65 127 C2H2 Transcription Factor Family AT1G74250 45.455 3.60e-09 57.4