Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00128 ATGTTGGAGCTGTGGCGCAAGCCACTCCAGATGTGCTTTGGTTGTGGACAAGGAGGGAACGATGATAGGCTCCTCTGGGACATGGACTTGAAGCCCCATGCTTCAGGGGACTATTCAATTGCAGTGGTACAAGCTAATTCAACCTTGGAAGACCAAGGACAAGTGTTTACCTCTCCCTCAGCAACTTTTGTTGGCGTATACGATGGTCATGGTGGACCTGAAGCTTCTTATTTCATCACCAACCATCTCTTCTCCTTCCTTCATGAGTTCGCTTCAGAGGAAGGTGGTTTGTCGGAGCAAGTGATAAAGAAGGCCTTTGATGCAACTGAAATGGAATTTTTGCATTTAGTGAAGCAATCGTGGACTGCACGGCCACAGATTGCTTCAGTGGGTTCGTGTTGTATTCTGGGAGCAATTTCAAACAGCGTTCTTTATATTGCTAATCTCGGTGATTCGAGGGCAGTTCTGGGTCGGAAAGCACTGGGAGGAGAGGTAAATTGTGCTCCTGTTGTGGCAGAGCGTTTGTCTACTGATTATAATGTTGGAGTGGAGGAGGTCAGAAAGGAGGTTGAGGCTCTTCACCCTGATGATGCAGACATTGTCGTTTACACTCGTGGATTTTGGCGAATCAAGGGCATTATTCAGGTGTCAAGATCAATTGGAGATGTTTATCTAAAGAAACCCGAGTTTGACGATAATCCTCTGTTCCAACAATTAGTTTGTCCAGTACCTTTAAAGAGATCTGTAATGACAGCAGAACCATCCATATTGACGCGGAAATTGAAGGCAGAAGATTTGTTTTTGATATTTGCATCAGACGGACTTTGGGAACATTTAACTGATGAAGAGGCTGTTCAAATCATATTAAGAAGTCCAAGAACAGGGATAGCAAAACGATTGGTGAGAGCTGCAGTGGAAGAGGCTGCAAAGAAAAGAGAAATGAGATATGAGGACTTAAAGAGAATTGAGAAAGGTCAAAGGCGCCATTTCCATGATGATATTACAGTGATCGTTCTGTACCTCGATCATTCACGAGGTTCTCTAGATGGTAGCTCAAGACATCGAGGAGTCTATGATTGTATCAGTACTCCTGTTGATATCTTCTCTCTGAATGCACATGAAGCTGACCTGTTAACTGAATAA 1143 0.4392 MLELWRKPLQMCFGCGQGGNDDRLLWDMDLKPHASGDYSIAVVQANSTLEDQGQVFTSPSATFVGVYDGHGGPEASYFITNHLFSFLHEFASEEGGLSEQVIKKAFDATEMEFLHLVKQSWTARPQIASVGSCCILGAISNSVLYIANLGDSRAVLGRKALGGEVNCAPVVAERLSTDYNVGVEEVRKEVEALHPDDADIVVYTRGFWRIKGIIQVSRSIGDVYLKKPEFDDNPLFQQLVCPVPLKRSVMTAEPSILTRKLKAEDLFLIFASDGLWEHLTDEEAVQIILRSPRTGIAKRLVRAAVEEAAKKREMRYEDLKRIEKGQRRHFHDDITVIVLYLDHSRGSLDGSSRHRGVYDCISTPVDIFSLNAHEADLLTE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00128 380 CDD PP2Cc 44 341 IPR001932 -
Gabi588g00128 380 ProSiteProfiles PPM-type phosphatase domain profile. 37 341 IPR001932 -
Gabi588g00128 380 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Gabi588g00128 380 PANTHER PROTEIN PHOSPHATASE 38 339 IPR015655 GO:0004722|GO:0006470
Gabi588g00128 380 Pfam Protein phosphatase 2C 59 310 IPR001932 -
Gabi588g00128 380 Gene3D - 28 347 IPR036457 -
Gabi588g00128 380 FunFam Probable protein phosphatase 2C 42 28 349 - -
Gabi588g00128 380 SUPERFAMILY PP2C-like 43 342 IPR036457 -
Gabi588g00128 380 SMART PP2C_4 12 339 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00128 Gabi-Chr588 1632929 1636341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00128 19 347 PP2C-type Phosphatase Gene Family AT3G51370 53.392 8.14e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00128 - K01102 gmx:100802394 598.971