Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00120 ATGCCTCGTGAACAAAACCGACAACCTCTGTTAGTGGAAGAGACAGAAGAAACTGCTTATGATTCCTCGGAGAAGGTTGTGGTGGTTGGAAACGACGAGTCCGAGGGTGACGTGGAGAACTGGGGTCGGGTGCCGCCGTTCTCATGGAAGAAGCTGTGGCTATTCACTGGCCCTGGATTTCTTATGAGCATCGCTTTTCTGGATCCTGGGAACCTGGAGGGAGATCTTCAGGCTGGTGCAATTGCTGGGTACTCGTTGTTATGGCTGCTAATGTGGGCTACGGCTATGGGGCTTGTTATTCAGCTTTTGTCAGCACGGCTTGGAGTGGCGACTGGTAGGCACTTGGCTGAACTTTGCAGAGAGGAGTACCCCACATGGGCCAGGATTACGCTGTGGTTGATGACCGAGTTGGCTCTTATTGGCTCTGACATACAAGAGGTTATTGGGAGCGCTATTGCTATCAGGATTCTTAGTAATGGGGTTGTTCCCCTCTGGGCTGGGGTCGTTATCACAGCTTTAGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGAAATTGGAAGCATTTTTTGCTGTTCTGATTGGTATAATGGCTATCTCATTTGCGTGGATGTTTGGTGAAGCAAAGCCCAATGGTGTTGATGTTCTTCTTGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATACAGCAAGCTGTTGGAGTTGTGGGTTGCATTATTATGCCTCACAATGTATTCTTGCATTCTGCGCTTGTTCAATCTAGGCACATTGACCCCAGCAAGAAAGGCCGTGTTCAAGAAGCTCTTAATTACTACTCTATAGAGTCCACAATCGCCCTTGTAGTCTCCTTTGTCATTAATATATTTGTCACAACTGTGTTTGCTAAGGGCTTTTATGGTACTGAAAAAGCAAATAGCATTGGTCTTGTAAATGCAGGGCAGTACCTTCAGGAGAAGTATGGGGGTGGACTATTCCCAATCCTATATATATGGGGAATTGGGTTATTAGCAGCTGGCCAAAGTAGCACTATTACTGGTACATATGCTGGACAATTTATCATGGGAGGTTTTCTGAATTTAAAGTTGAAAAAATGGATGAGGGCGTTAATTACCCGAAGTTGTGCAATCATCCCAACCATAATAGTTGCTCTCATATTTGATACCTCCGAGGACTCATTAGATGTTTTGAATCAATGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTCATTCCCTTGCTTTGTTTGGCCTCCAAGGAACAGATAATGGGCAGTTTCAAAATTGGCCCTGTCCTCAAGATTATTTCCTGGCTTGTGGCTGTTCTGGTGATAGTGATAAATGGCTATCTTTTACTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAGTGTTCGCCAGTATAGTGTGTGCAATAACAGCTGCATATGTTGCATTTGTACTATACCTTATTTCACGGGCCATTACCTTTTCACCTTGGTCTCGACCAAAGACAGTTGCTAGCACAGAGAATTAA 1527 0.4434 MPREQNRQPLLVEETEETAYDSSEKVVVVGNDESEGDVENWGRVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLVIQLLSARLGVATGRHLAELCREEYPTWARITLWLMTELALIGSDIQEVIGSAIAIRILSNGVVPLWAGVVITALDCFIFLFLENYGVRKLEAFFAVLIGIMAISFAWMFGEAKPNGVDVLLGILVPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRHIDPSKKGRVQEALNYYSIESTIALVVSFVINIFVTTVFAKGFYGTEKANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLKLKKWMRALITRSCAIIPTIIVALIFDTSEDSLDVLNQWLNVLQSVQIPFALIPLLCLASKEQIMGSFKIGPVLKIISWLVAVLVIVINGYLLLEFFSSEVNGAVFASIVCAITAAYVAFVLYLISRAITFSPWSRPKTVASTEN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00120 508 Pfam Natural resistance-associated macrophage protein 73 434 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PRINTS Natural resistance-associated macrophage protein signature 186 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PRINTS Natural resistance-associated macrophage protein signature 161 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PRINTS Natural resistance-associated macrophage protein signature 131 157 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PRINTS Natural resistance-associated macrophage protein signature 404 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PRINTS Natural resistance-associated macrophage protein signature 235 258 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 Hamap Divalent metal cation transporter MntH [mntH]. 38 460 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 41 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 50 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi588g00120 508 NCBIfam Nramp family divalent metal transporter 57 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00120 Gabi-Chr588 1550394 1553906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00120 1 497 Inorganic Solute Cotransporters AT2G23150 79.482 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00120 K21398 - gmx:100807811 906.36