Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00113 ATGTCCCCATTCTTCTATTTCTCCCTCATCTCTCTTGTTTTTCTTGTCACTTTGAAGCTCTTGTTCCAAACAAGAAGATTCAAAAACCTTCCTCCAGGTCCACCTTCTCTTCCTATTATTGGAAACCTTCATAAACTCAAACAGCCACTCCACCGCACCTTCCATGCTCTATCACAAAAATATGGTCAAACCTTTTCTCTTTGGTTCGGATCCCGTCTTGTAGTTGTTGTTTCATCACCATCAGCAGTGCAAGAATGCTTTACCAAAAACGATATCATCCTAGCAAACCGTCCACAATTTCTCACAGGCAAGTACATCGGCTACAACAACACCACCGTATCAGTATCCCCCTACGGCGACCATTGGCGCAATCTCCGCCGCATCATATCACTTGAGGTTCTCTCTTCACACCGTCTCAACTCTTTCTTGGAAATTCGAAAGGACGAGATCATGAGGCTAATACGAAAGCTGGCTCAGGACTCGTGCAAGGACTTTGCCAAAGTGGAGCTCAAAACTAAGTTTTCAGAAATGACGTTTAACACTATAATGAGAATGGTCTCAGGGAAAAGATATTACGGTGAAGACTGTGACGTCACAGATGTTGAGGAAGCAAGGAAATTCCGAGAAATCGTCAAACAGTTGGTAACGTTAGGAGGGGCAAACAACCCAAGTGACTTCTTAGCATTACTGAGGTGGTTTGATTTTGATGATTTGGAGAAGAGGCTAAAGAGGATTAGTAAGAGAACAGATGCGTTCTTACAAGGACTCGTTGATGAGCATCGTAATGGGAAACAGCATGCCAATACCATGATAGACCATCTCTTAACCCAACAACAAACACAGCCTGAATACTATACTGATCAAATCATCAAAGGACTTGTTCTGGTAATGCTGCTTGCAGGAACAGACACGTCATCTGTGACTTTAGAATGGGCAATGTCTAATTTATTGAATCATCCAGAAATATTGAAAAAGGCAAAAAATGAAATAGATACACAAATAGGACAAGATCGCCTGGTAGATGAGCCTGACATTTCCAAACTCCCTTACCTTCAAGGCATTGTGTATGAGACACTTCGGTTGCATCCTGCCGCTCCATTATTGGTACCCCATTTGTCTTCAGAAGATTGCAGTGTAGGAGAATATAATATCCCACAAAACACTATTGTGTTGGTTAATGCTTGGGCCATTCATAGAGATCCCAAGTTGTGGTGTGACCCTACACGCTTTAAGCCCGAGAGGTTTGAGAAAGAAGGCGAAGCAAACAAGCTGCTTTCATTTGGGTTAGGTAGAAGGGCTTGTCCTGGAGCAAACTTGGCTCAACGCACAGTAGGCTTAACTTTGGGCTTATTGATTCAATGCTTTGAATGGAAACGAATAGGAGAGGAAAAAATTGACATGACTGAAGAAAAGGGACTCACCATGCCAAAGAAAATTTCCTTAGAAGCCATGTGTAAAGTGCGCCTACCATTGGCATACAGTTGA 1485 0.4263 MSPFFYFSLISLVFLVTLKLLFQTRRFKNLPPGPPSLPIIGNLHKLKQPLHRTFHALSQKYGQTFSLWFGSRLVVVVSSPSAVQECFTKNDIILANRPQFLTGKYIGYNNTTVSVSPYGDHWRNLRRIISLEVLSSHRLNSFLEIRKDEIMRLIRKLAQDSCKDFAKVELKTKFSEMTFNTIMRMVSGKRYYGEDCDVTDVEEARKFREIVKQLVTLGGANNPSDFLALLRWFDFDDLEKRLKRISKRTDAFLQGLVDEHRNGKQHANTMIDHLLTQQQTQPEYYTDQIIKGLVLVMLLAGTDTSSVTLEWAMSNLLNHPEILKKAKNEIDTQIGQDRLVDEPDISKLPYLQGIVYETLRLHPAAPLLVPHLSSEDCSVGEYNIPQNTIVLVNAWAIHRDPKLWCDPTRFKPERFEKEGEANKLLSFGLGRRACPGANLAQRTVGLTLGLLIQCFEWKRIGEEKIDMTEEKGLTMPKKISLEAMCKVRLPLAYS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00113 494 FunFam Cytochrome P450 family protein 22 491 - -
Gabi588g00113 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Gabi588g00113 494 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PANTHER CYTOCHROME P450 82C3-RELATED 13 491 - -
Gabi588g00113 494 CDD CYP81 62 481 - -
Gabi588g00113 494 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 SUPERFAMILY Cytochrome P450 31 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 Pfam Cytochrome P450 31 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00113 494 Gene3D Cytochrome P450 19 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00113 Gabi-Chr588 1439648 1441862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00113 1 488 Cytochrome P450 AT4G37330 59.063 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00113 K13260 - gmx:100811727 824.698