Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00110 ATGGAAGACAACCTTATCTACATCCTTTCCTTCCTCCTTTTTCTTATCACTTTAAAGCTATTATTCTTCAGAAAAAGATACAAAAATCTACCACCGAGCCCACCTTCTCTTCCGATAATCGGAAACCTCCATCAGCTGAAACCACCACTTCACCGTACCTTCCAAGGTCTCTCACAGAAATATGGCCCAATTTTCTCCCTCAGATTCGGGTCTCAACTCGTGGTGGTCGTTTCATCTGCATCCGCTGCCGAAGAATGTTTCACCAAAAACGACATCATTTTCGCGAACCGTTTTCACTCTCTCAAGTCCAAGTATCTTGCCTTTAACCACACCACTCTAATTACATCATCATATGGCGACCACTGGCGCAACTTACGTCGTATCAGCTCACTCGAGATCCTCTCCACTCACCGTCTCAACTCCTTTTTGAGAATCCGAAAGGACGAGACCGCGAGGTTGCTTCGAAGACTGTCTGAGGGCTCTTATAAAGATTTCACAAAAGTGGAGCTCAAGTCCAAGTTTTCGGAGCTAACATTTAACATTATCATGAGAATGGTCTGTGGTAAACGCTATTACGGCGAGGAATATGATGGGACTAACGCCGAGGAAGCTAAGAAGTTTAGAGACGTTATGAATGAGATGGCAGCGTTCGGTTTGGGATCGAACCTCGGGGATTTTGTGCCTGTTTTCAGGTTGTTCGATTTTAATGGTGACCGTAAGAATATAAAAAGGGTTGGGGATAAGGTGGACGCGCTTTTCCAAGGACTCATCGATGAGCATCGGAATAAGAAGGAGTGTTCAAATACCATGATAGAACATCTACTTTCCTCACAAGAAGCACAGCCTGAGTATTACACTGATCAAATTATCAAAGGACTTGTTATGGTGTTGATAGTGGCTGGAACAGAAACTTCCGCATCGACATTAGAGTGGGCGATGTCAAATCTGTTAAACCATCCAGAGGTGTTGGAGAAAGCAAGGATTGAATTGGACAATCAAGTTGGACAAGATCGTTTGATGGAGGAATCGGATGTTACCAAATTACCGTACCTTCAGAATATAATCTCCGAGACTCTGCGATTGTATCCTGTGGCGCCACTCCTGGTACCTCATTTCTCCTCCGATGACTGCACAGTGGGAGGTTATGATGTGCCACGTAAGACGATGCTAATGGTAAATGCGTGGGCCATCCATAGGGACCCACAGCAGTGGGATGACCCAACAAGTTTTAAGCCCGAGAGGTTTGAGAACGGTCAAGCGGACGCGCATAGCCTCTTCTCTTTTGGAATGGGGAGGAGGGCATGTCCTGGGTCAGGGTTGGCCCATAGGACTCTAGGCTTGACTATAGGCTCGCTGATTCAATGCTTTGAGTGGAAAAGGATTGGAAAGGAAGAAATTGACATGACCGAAAGAGCCGGAACTGTGATGCCTAAGGCCATTCCATTGGAGGCCCAATGCAAAGCGCGTCCAATCATCAGCAAGATTTTCTCGGAACTATAG 1500 0.4593 MEDNLIYILSFLLFLITLKLLFFRKRYKNLPPSPPSLPIIGNLHQLKPPLHRTFQGLSQKYGPIFSLRFGSQLVVVVSSASAAEECFTKNDIIFANRFHSLKSKYLAFNHTTLITSSYGDHWRNLRRISSLEILSTHRLNSFLRIRKDETARLLRRLSEGSYKDFTKVELKSKFSELTFNIIMRMVCGKRYYGEEYDGTNAEEAKKFRDVMNEMAAFGLGSNLGDFVPVFRLFDFNGDRKNIKRVGDKVDALFQGLIDEHRNKKECSNTMIEHLLSSQEAQPEYYTDQIIKGLVMVLIVAGTETSASTLEWAMSNLLNHPEVLEKARIELDNQVGQDRLMEESDVTKLPYLQNIISETLRLYPVAPLLVPHFSSDDCTVGGYDVPRKTMLMVNAWAIHRDPQQWDDPTSFKPERFENGQADAHSLFSFGMGRRACPGSGLAHRTLGLTIGSLIQCFEWKRIGKEEIDMTERAGTVMPKAIPLEAQCKARPIISKIFSEL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00110 499 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 Pfam Cytochrome P450 31 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 CDD CYP81 62 482 - -
Gabi588g00110 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Gabi588g00110 499 Gene3D Cytochrome P450 23 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 SUPERFAMILY Cytochrome P450 31 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi588g00110 499 PANTHER CYTOCHROME P450 82C3-RELATED 11 489 - -
Gabi588g00110 499 FunFam Cytochrome P450 family protein 22 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00110 Gabi-Chr588 1400181 1401836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00110 8 498 Cytochrome P450 AT4G37340 60.120 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00110 K13260 - gmx:100804509 759.599