Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00077 ATGGCGTCGAAGCCTCCGCCTTCGTCTTCGCCCTCTTCTTCCAGATCAGAGCCTCCCGTCGATCCCTCCACAAAGAAAGTGGAGGAGGGAAGTCCTACTGTAAAAGATGTGTTATTGGTTATTGATTCTTTGAAGAAACAAGTTGCTGCTGACCGTGTTGTGTCTGTAAAGAAAAGAATGGAAGAAAATAGACAGAAGCTTGTTGGTGTCACAAACAATCTGTGCAAAATGTCGATGGAGAGAAGGACCTGCAGCATGACGGACACGGATAGAAGTCTGGACCTACTGACAAAGAGGCAACAAGATGCAATAGATATGCACAATGGTGTTCAGGCAAGTAATGGTGATAGGGAGAGCAATGGCCATCATGAAGATAGCCATGGTTCTACAGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGTCCTATCAAGTTGCCTGAAGTAAAAAGATTACCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAGTCAGTTGTTGGTCGGAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGACAGTGAGGAAGAAATAATAGACGATGAAGAGGAAAAAAAAGAATTTGTAGAATCAGAAGATTATATTCTTCGCATGACTATCAGAGAATTTGGTTTGTCTGATGTTGTTCTGGAGTCGCTGGCTCAGTGTTTTTCTAGAAACAGCAGTGAAATTAAGGCAAGAAATGAAGCCCTTAGTAATGAAGACAATGCTGGTGGGGGTTCCAAGAATGGAGATACTGAAGAGAATTCTCAAAGTGGAAATTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGCCGACGATGTCTTGTTTTTGATTGCAGATTACATGGATGTTCGCAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTCTGTGGATCCCTCCTCATACTGAAAATGCACCATGTGGGCCAAATTGTTTCCAAGCGGTACTTAAGTCTGAAAGATTTGCGAAAGTCACCTCTTCTGCCCAGGCTGATGTTGAAGACAAATGCTCTAATGGTGCTTTATCTAGGAAGAAGTCTTCTGCTAGAAGGCGGATAAAATCCAATCAAAGTGAAAGTGCTTCATCTAATGCGAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGTTTCAGCCTCCCACCCAGCACCTCCTAAAACTAAACCTGTGGGGAAAGGTGCAATTGGTAAGAGAAACAGTAAGCGAGTGGCAGAACGCGTTCTAGTTTGCATGCAGAAGCGGCAAAAGAAAACAGGGGCTTCTGATTCTGATTGCATTGTGAGTAGTGTTCTATGTTCAGGTGACTTGCATTTAATTTCAATTATTGCCAAGATAGTGAAGAAACAATTATTTTAAATGTGTCAAATTTCTTTACATTGGAAGATCTAGAAGGAACAGGTTCATAATAATCTGTATATAATGCAGGGTGAAGCTCTTGACCGTTCATTGAATGAGATGGTTACTGACCAAGCTGTCATGAGCAATGAAGACAACGTAAGGAAAGAAGAGTTTGTGGATGAGAACATTTGTAAACAAGTATTCACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGACTTCTTGAGAAAGGAATGAATATTTTTGGCAGAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTCTAAAGACGTGTTGGGATGTTTTCCAATACATGAATTGCGAAGAAGGAAAGATGTCTGGTCCTGCTGGGGATGCTGCAAATTCTCTTGTGGAAGGCTATTCAAAGGGTAATAATGAAGCGAGGCGAAGGTCAAGATTTTTACGTAGAAGAGGAAGAGTCCGTCGCTTAAAGTATACCTGGAAATCTGCTGCTTATCATTCAATAAGAAAAAGGATTACAGAGAGAAAGGATCAGCCCTGTCGGCAGTACAATCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCTTGCTTTGCTGCAGATAGGGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTTAGTTGCGGTGATGGTACTCTTGGGATTCCTAGCCAAAGAGGGGATAATTATGAATGCAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGAGTTCTTCTTGGAAAGTCAGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACAGGAGAGTTAATTTCTCATCGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCGTACCGGAAGGGTGATAAATTGAAGTTTGCAAACCATTCTCCTGATCCAAATTGCTATGCGAAGGTTATCATGGTTGCTGGTGATCACAGGGTAGGAATTTTTGCCAAGGAACGGATTAGTGCTGGGGAGGAACTGTTTTATGATTATCGTTATGAGCCCGATAGAGCTCCTGCCTGGGCTCGGAAGCCAGAGGCTTCTGGATCCAAAAAAGAGGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCGTAA 2739 0.4221 MASKPPPSSSPSSSRSEPPVDPSTKKVEEGSPTVKDVLLVIDSLKKQVAADRVVSVKKRMEENRQKLVGVTNNLCKMSMERRTCSMTDTDRSLDLLTKRQQDAIDMHNGVQASNGDRESNGHHEDSHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIDDEEEKKEFVESEDYILRMTIREFGLSDVVLESLAQCFSRNSSEIKARNEALSNEDNAGGGSKNGDTEENSQSGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPLWIPPHTENAPCGPNCFQAVLKSERFAKVTSSAQADVEDKCSNGALSRKKSSARRRIKSNQSESASSNAKNISESSDSENGPGRDAVSASHPAPPKTKPVGKGAIGKRNSKRVAERVLVCMQKRQKKTGASDSDCIVSSVLCSGDLHLISIIAKIVKKQLFXMCQISLHWKIXKEQVHNNLYIMQGEALDRSLNEMVTDQAVMSNEDNVRKEEFVDENICKQVFTDNKSWKALEKGLLEKGMNIFGRNSCLIARNLLNGLKTCWDVFQYMNCEEGKMSGPAGDAANSLVEGYSKGNNEARRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGKSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00077 912 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 912 IPR025778 GO:0031519
Gabi588g00077 912 MobiDBLite consensus disorder prediction 886 905 - -
Gabi588g00077 912 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 31 910 IPR045318 GO:0006338|GO:0042054
Gabi588g00077 912 MobiDBLite consensus disorder prediction 1 20 - -
Gabi588g00077 912 ProSiteProfiles SET domain profile. 763 878 IPR001214 GO:0005515
Gabi588g00077 912 MobiDBLite consensus disorder prediction 886 912 - -
Gabi588g00077 912 SUPERFAMILY SET domain 637 883 IPR046341 -
Gabi588g00077 912 MobiDBLite consensus disorder prediction 257 278 - -
Gabi588g00077 912 CDD SET_EZH 763 879 - -
Gabi588g00077 912 ProSiteProfiles CXC domain profile. 649 748 IPR026489 -
Gabi588g00077 912 MobiDBLite consensus disorder prediction 369 428 - -
Gabi588g00077 912 Coils Coil 195 215 - -
Gabi588g00077 912 Gene3D SET domain 663 880 IPR046341 -
Gabi588g00077 912 Pfam CXC domain 701 732 IPR041355 -
Gabi588g00077 912 MobiDBLite consensus disorder prediction 379 404 - -
Gabi588g00077 912 MobiDBLite consensus disorder prediction 1 31 - -
Gabi588g00077 912 Pfam SET domain 774 877 IPR001214 GO:0005515
Gabi588g00077 912 SMART set_7 763 884 IPR001214 GO:0005515
Gabi588g00077 912 MobiDBLite consensus disorder prediction 103 131 - -
Gabi588g00077 912 FunFam Putative histone-lysine N-methyltransferase EZH2 663 880 - -
Gabi588g00077 912 SMART CXC_2 697 734 IPR033467 -
Gabi588g00077 912 MobiDBLite consensus disorder prediction 250 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00077 Gabi-Chr588 1069671 1078829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00077 752 881 C2H2 Transcription Factor Family AT2G23740 26.531 1.51e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi588g00077 SET 4.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00077 - K11430 gmx:100799832 1497.64