Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00074 ATGGCTTTCATTAAGGACGAGCAACAAGAGACCCAAATCCAGAATGAACTTGGTCACAAAAGTCTCCTTCCGAGCGATGCACTCAATCAGTATATACTCGAAACCAACGTGTACCCAAGAGAGCATGAGAGCTTGAAGGAGCTCCGCCAGTGGACAGAAAAACATCCTCGGAACCGCATGGCTACAACACCTGATGGAGGACAACTCATAAGCATGCTTGTTAAGCTGATCAATGCCAAGAACACCATGGAAATAGGTGTCTACACTGGTTACTCTTTGCTCGCCACCGCCCTAGCTCTCCCATCCGACGGAAAGATCTTGGCTATGGACATTAACCGGGAATCCTATGAACTGGGGTTGCCTATAATTCAAAAAGCTGGCGTGGCTGACAAGATTGACTTTATAGAAGGACCTGCTCTTTCTCTTCTTGACGAATTGATCAAAGATGAAAAGAATAAGGGAACGTTCGATTTCATTTTCGTGGATGCTGATAAGGATAACTACTTAAACTACCACGAGAGGGTGATTGAGCTCGTGAAGGTTGGGGGACTGATCGGCTACGATAACACCCTATGGAATGGATCCGTGGTGACCCCACCTGATGCGCCTATGAATGATTATATTAAGTATTCTCTTGGTTTTGTGCTGGAGCTGAATAAAGCTATTGCTCTTGATTCGAGGGTCGAGATTTGCCAGCTTCCAGTTGGTGATGGGATTACCTTGTGCCGCCGCATCATCTGA 741 0.4629 MAFIKDEQQETQIQNELGHKSLLPSDALNQYILETNVYPREHESLKELRQWTEKHPRNRMATTPDGGQLISMLVKLINAKNTMEIGVYTGYSLLATALALPSDGKILAMDINRESYELGLPIIQKAGVADKIDFIEGPALSLLDELIKDEKNKGTFDFIFVDADKDNYLNYHERVIELVKVGGLIGYDNTLWNGSVVTPPDAPMNDYIKYSLGFVLELNKAIALDSRVEICQLPVGDGITLCRRII 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00074 246 PANTHER O-METHYLTRANSFERASE-RELATED 19 245 - -
Gabi588g00074 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
Gabi588g00074 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Gabi588g00074 246 Pfam O-methyltransferase 35 245 IPR002935 GO:0008171
Gabi588g00074 246 Gene3D Vaccinia Virus protein VP39 10 246 IPR029063 -
Gabi588g00074 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00074 Gabi-Chr588 1051143 1052708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00074 5 245 Monolignol Biosynthesis Gene Families AT4G34050 73.554 1.16e-133 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00074 K00588 - gmx:100799303 406.371