Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00050 ATGGAGATCGCTGAGGTCGGTGTCAAGACACGAGCTCGAGCAGCATTAGCCATGGGAGCTACCAGTTCAGCTGCACGAACACCGAAGAGAACGAAGATCAACAACAGCAACAGCAACGAAGAGCAAAAATTCTCAACAGCATCGTCAGCTTTCGTTCAGCTCAAGAGTCGGAGTAGGAGTGCTGCCGTCGTCAAGCTGGAGACGGCGACAGTTCTGCCGGAACTTGAGACGGAACAAAGCTGCTCCAGTCCTTCCTCCGTTGAATTCCCGGCGTCTTGTTGTTCTAGCAACGGATCCATTGGCCTCGATGAGGAGAGGATCAAATTGATAGATCTGGAGGTGGAGAGCGCTCAAGTTGAAACTTCAACGTGCAACTGCGGTGAAGAATTTGAAAGGAGAGAGATGAGCCACTCGAGCGAGCTTCCAGAAAATTTACAAGAGCTGGAGTCAATGGAAACCAATTATCGCCATCCTTTATCAACGGCGCAAAACATGCCAACGGAGTTGGAGCTCGAAGAATTCTTTGCCACCGCCGAGAAAGACATTCAGAAACAGTTTCAAGACAAGTATAATTATGATATTGTGAAAGACGTGCCCTTGGAAGGACGCTACGAGTGGATTCAGCTGAAGCCATAG 636 0.4921 MEIAEVGVKTRARAALAMGATSSAARTPKRTKINNSNSNEEQKFSTASSAFVQLKSRSRSAAVVKLETATVLPELETEQSCSSPSSVEFPASCCSSNGSIGLDEERIKLIDLEVESAQVETSTCNCGEEFERREMSHSSELPENLQELESMETNYRHPLSTAQNMPTELELEEFFATAEKDIQKQFQDKYNYDIVKDVPLEGRYEWIQLKP 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00050 211 PIRSF CKI_KRP_plant 3 211 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gabi588g00050 211 Gene3D p27 142 211 IPR044898 -
Gabi588g00050 211 MobiDBLite consensus disorder prediction 24 48 - -
Gabi588g00050 211 Pfam Cyclin-dependent kinase inhibitor 165 207 IPR003175 GO:0004861|GO:0005634|GO:0051726
Gabi588g00050 211 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 6 210 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gabi588g00050 211 MobiDBLite consensus disorder prediction 17 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00050 Gabi-Chr588 740971 743060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00050 106 211 Core Cell Cycle Gene Families AT1G49620 41.964 1.97e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00050 - - gmx:547743 231.106