Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00037 ATGGGTCTCTGCAATTCGAAACCCTCTTCAAATCACACTCTTTCGTTTCGCCAATCCGACAATCACTCACCCAGGAACGACCCCCCACAGCCTCAACACAACTCCTTCACAGTTAATCACAGTGCTGAACCTCACTCCAATTCCGTCAATGGCGAAAACCCTAACAAGGAGAACAAAGAGCCAGAGAATGGTAAAAAATCTCCATTTTTCCCGCTTTACAGTCCGAGTCCGGCTCACCATTTGTTCTCCAAGAAGTCCCCGGCGAACGGTAGCTCGCCGATGCGGTTTTTCAAGCGGCCGTTCCCGCCGCCGTCTCCGGCGAAGCATATAAGATCCTTGCTGGCTCGGCGGCATGGTTCGTCGAAGCCTAATGAGGCTCCGATACCGGAAGCCGTCGAATCGGAGGTGGTCGCTGGGCTCGACAAGAACTTCGGATTCTCGAAGCATTTCGGAAACAAATATGATCTTGGAGATGAGGTTGGGAGAGGCCATTTTGGATACACCTGTGTTGCCACGCTTAAGAAAGGAGAGCTCAAAGGTCAACAAGTGGCCGTCAAAGTCATTCCAAAAGCCAAGATGACCACTGCTATTGCTATTGAGGATGTGAGAAGAGAAGTACAAATATTAAGAGCTTTGACTGGACACAAGAATCTAGTACAGTTCTATGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAATTGTGTGAAGGAGGAGAGCTGTTGGACAGAATATTATCAAGAGGTGGCAAATACACAGAGGAGGATGCAAAAGCTGTCCTGAGACAAATACTGAACGTTGTTGCTTTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTTTTGTTCACATCCAAGGATGAGAACTCAGAGCTGAAGGCCATAGACTTTGGGTTGTCTGATTTTGTTAAACCAGATGAAAGACTTAATGATATTGTTGGTAGTGCATACTACGTGGCTCCTGAAGTTCTACATAGAGCTTACAGTACAGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGCCGTCCATTTTGGGCCCGGACCGAGTCCGGTATCTTTCGCACTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGCTGAAGCAAGGAGTTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAAAGAATGACTGCAGCACAGGCATTAAGTCATCCATGGATTAGAATCTATAAAGATGTTAAAGTGCCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGATCCTCATCTCTGCGAAAAGCAGCTATAAGGGCTCTGTCTAAGACGTTAACCGTTGATGAGCTTTTTTATTTTAAAGAGCAGTTTGCACTTTTAGGGCCAAACAAAAATGGTACCATTAGCTTGGAAAATATCAAAGAGGCCTTGATGATAAATGCAACGGATGCTATGAAAGAGTCACGCGTTACTGACTTTCTGGCATCACTTAATGCTTTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTGCTGCCGCACTTAGTGTTCATCAATTTGAAGCACTTGACGGGTGGGAGCACATTGCTCGTTGTGCCTATGAACTTTTTGAAAAGGATGGAAACAAGGCTATAGTCATTGAGGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTTCATGACTGGATTCGGCACACGGATGGAAAGTTAAGCTTCCTTGGATTTGTGAAATTGCTGCATGGCCCATCTAGAAGTCTTGTAAAAGCTCAATAG 1824 0.4452 MGLCNSKPSSNHTLSFRQSDNHSPRNDPPQPQHNSFTVNHSAEPHSNSVNGENPNKENKEPENGKKSPFFPLYSPSPAHHLFSKKSPANGSSPMRFFKRPFPPPSPAKHIRSLLARRHGSSKPNEAPIPEAVESEVVAGLDKNFGFSKHFGNKYDLGDEVGRGHFGYTCVATLKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVQILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEPPWPSLSAEARSFVKRLLNKDPRKRMTAAQALSHPWIRIYKDVKVPLDILIFKLMKAYMRSSSLRKAAIRALSKTLTVDELFYFKEQFALLGPNKNGTISLENIKEALMINATDAMKESRVTDFLASLNALQYRRMDFDEFCAAALSVHQFEALDGWEHIARCAYELFEKDGNKAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKAQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00037 607 FunFam CDPK-related kinase 1 147 242 - -
Gabi588g00037 607 MobiDBLite consensus disorder prediction 1 108 - -
Gabi588g00037 607 ProSiteProfiles Protein kinase domain profile. 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi588g00037 607 FunFam Calcium-dependent protein kinase SK5 326 420 - -
Gabi588g00037 607 FunFam CDPK-related kinase 3 146 318 - -
Gabi588g00037 607 Gene3D Phosphorylase Kinase; domain 1 147 243 - -
Gabi588g00037 607 FunFam CDPK-related kinase 1 452 525 - -
Gabi588g00037 607 SUPERFAMILY EF-hand 445 598 IPR011992 -
Gabi588g00037 607 PANTHER SERINE/THREONINE-PROTEIN KINASE 138 582 - -
Gabi588g00037 607 CDD STKc_CAMK 153 415 - -
Gabi588g00037 607 Pfam Protein kinase domain 155 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi588g00037 607 MobiDBLite consensus disorder prediction 1 54 - -
Gabi588g00037 607 SMART serkin_6 154 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi588g00037 607 SUPERFAMILY Protein kinase-like (PK-like) 151 438 IPR011009 -
Gabi588g00037 607 Gene3D - 436 525 - -
Gabi588g00037 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Gabi588g00037 607 ProSitePatterns Protein kinases ATP-binding region signature. 160 186 IPR017441 GO:0005524
Gabi588g00037 607 Gene3D Transferase(Phosphotransferase) domain 1 244 435 - -
Gabi588g00037 607 Gene3D - 441 595 - -
Gabi588g00037 607 ProSiteProfiles EF-hand calcium-binding domain profile. 458 493 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00037 Gabi-Chr588 503914 508870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00037 1 607 EF-hand Containing Proteins AT3G50530 72.910 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi588g00037 Pkinase 3.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00037 K13412 - ming:122073850 986.482