Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00036 ATGGGTCTCTGCAATTCGAAACCCTCTTCAAATCACACTCTTTCGTTTCGCCAATCCGACAATCACTCACCCAGGAACGACCCCCCACAGCCTCAACACAACTCCTTCACAGTTAATCACAGTGCTGAACCTCACTCCAATTCCGTCAATGGCGAAAACCCTAACAAGGAGAACAAAGAGCCAGAGAATGGTAAAAAATCTCCATTTTTCCCGCTTTACAGTCCGAGTCCGGCTCACCATTTGTTCTCCAAGAAGTCCCCGGCGAACGGTAGCTCGCCGATGCGGTTTTTCAAGCGGCCGTTCCCGCCGCCGTCTCCGGCGAAGCATATAAGATCCTTGCTGGCTCGGCGGCATGGTTCGTCGAAGCCTAATGAGGCTCCGATACCGGAAGCCGTCGAATCGGAGGTGGTCGCTGGGCTCGACAAGAACTTCGGATTCTCGAAGCATTTCGGAAACAAATATGATCTTGGAGATGAGGTTGGGAGAGGCCATTTTGGATACACCTGTGTTGCCACGCTTAAGAAAGGAGAGCTCAAAGGTCAACAAGTGGCCGTCAAAGTCATTCCAAAAGCCAAGATGACCACTGCTATTGCTATTGAGGATGTGAGAAGAGAAGTACAAATATTAAGAGCTTTGACTGGACACAAGAATCTAGTACAGTTCTATGATGCATATGAAGACCATGATAATGTCTATATAGTAATGGAATTGTGTGAAGGAGGAGAGCTGTTGGACAGAATATTATCAAGAGGTGGCAAATACACAGAGGAGGATGCAAAAGCTGTCCTGAGACAAATACTGAACGTTGTTGCTTTTTGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTTTTGTTCACATCCAAGGATGAGAACTCAGAGCTGAAGGCCATAGACTTTGGGTTGTCTGATTTTGTTAAACCAGGTATGTTTTTATTCCTTTTTCTTATTTTGCATGCCATTTATTATCTTAGACTTGCTTTGTTTTTCAACTTTCCATTGTTCTTTCCAGATGAAAGACTTAATGATATTGTTGGTAGTGCATACTACGTGGCTCCTGAAGTTCTACATAGAGCTTACAGTACAGAGGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGCCGTCCATTTTGGGCCCGGACCGAGTCCGGTATCTTTCGCACTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGCTGAAGCAAGGAGTTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAAAGAATGACTGCAGCACAGGCATTAAGTCATCCATGGATTAGAATCTATAAAGATGTTAAAGTGCCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGATCCTCATCTCTGCGAAAAGCAGCTATAAGGGCTCTGTCTAAGACGTTAACCGTTGATGAGCTTTTTTATTTTAAAGAGCAGTTTGCACTTTTAGGGCCAAACAAAAATGGTACCATTAGCTTGGAAAATATCAAAGAGGCCTTGATGATAAATGCAACGGATGCTATGAAAGAGTCACGCGTTACTGACTTTCTGGCATCACTTAATGCTTTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTGCTGCCGCACTTAGTGTTCATCAATTTGAAGCACTTGACGGGTGGGAGCACATTGCTCGTTGTGCCTATGAACTTTTTGAAAAGGATGGAAACAAGGCTATAGTCATTGAGGAACTAGCTTCGGAGCTTGGGCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTTCATGACTGGATTCGGCACACGGATGGAAAGTTAAGCTTCCTTGGATTTGTGAAATTGCTGCATGGCCCATCTAGAAGTCTTGTAAAAGCTCAATAG 1911 0.438 MGLCNSKPSSNHTLSFRQSDNHSPRNDPPQPQHNSFTVNHSAEPHSNSVNGENPNKENKEPENGKKSPFFPLYSPSPAHHLFSKKSPANGSSPMRFFKRPFPPPSPAKHIRSLLARRHGSSKPNEAPIPEAVESEVVAGLDKNFGFSKHFGNKYDLGDEVGRGHFGYTCVATLKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVQILRALTGHKNLVQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVLRQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPGMFLFLFLILHAIYYLRLALFFNFPLFFPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEPPWPSLSAEARSFVKRLLNKDPRKRMTAAQALSHPWIRIYKDVKVPLDILIFKLMKAYMRSSSLRKAAIRALSKTLTVDELFYFKEQFALLGPNKNGTISLENIKEALMINATDAMKESRVTDFLASLNALQYRRMDFDEFCAAALSVHQFEALDGWEHIARCAYELFEKDGNKAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKAQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00036 636 MobiDBLite consensus disorder prediction 1 108 - -
Gabi588g00036 636 PANTHER SERINE/THREONINE-PROTEIN KINASE 138 611 - -
Gabi588g00036 636 Gene3D - 465 554 - -
Gabi588g00036 636 SMART serkin_6 154 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi588g00036 636 SUPERFAMILY Protein kinase-like (PK-like) 151 467 IPR011009 -
Gabi588g00036 636 Gene3D Phosphorylase Kinase; domain 1 147 243 - -
Gabi588g00036 636 Gene3D Transferase(Phosphotransferase) domain 1 244 464 - -
Gabi588g00036 636 MobiDBLite consensus disorder prediction 1 54 - -
Gabi588g00036 636 ProSiteProfiles EF-hand calcium-binding domain profile. 487 522 IPR002048 GO:0005509
Gabi588g00036 636 FunFam Calcium-dependent protein kinase SK5 355 449 - -
Gabi588g00036 636 FunFam CDPK-related kinase 1 481 554 - -
Gabi588g00036 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Gabi588g00036 636 ProSitePatterns Protein kinases ATP-binding region signature. 160 186 IPR017441 GO:0005524
Gabi588g00036 636 SUPERFAMILY EF-hand 474 627 IPR011992 -
Gabi588g00036 636 FunFam CDPK-related kinase 3 146 316 - -
Gabi588g00036 636 CDD STKc_CAMK 153 444 - -
Gabi588g00036 636 ProSiteProfiles Protein kinase domain profile. 154 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi588g00036 636 Gene3D - 470 624 - -
Gabi588g00036 636 Pfam Protein kinase domain 155 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi588g00036 636 FunFam CDPK-related kinase 1 147 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00036 Gabi-Chr588 503914 508870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00036 1 636 EF-hand Containing Proteins AT3G50530 73.692 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi588g00036 Pkinase 7.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi588g00036 K13412 - ming:122073850 971.074