Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00033 ATGTCATCATCGAATTCACCGTGCGCAGCGTGCAAGTTTCTGCGGCGGAAGTGCACGCAAGAGTGCGTGTACGCACCGTACTTTCCACCGGACAACCCTCAGAGGTTTGCTTACGTGCACAAGGTTTTCGGCGCCAGCAACGTGGCCAAGCTGCTGAACGAGCTCAACGCTGCGCAGCGAGACGACGCAGTCAAGTCCCTTGCTTATGAGGCGGAGGCCCGCCTTAGGGACCCCGTCTACGGTTGCGTGGGCCTCATCTCGGTCCTCCAACACAAGCTCAGGCAGATCCAGGTGGAACTCAATAATGCCAAGAAGGAACTCGCAACCTATATTGGACCCCAGGCTATGCAGGGCATGCCCACCACCATTCTACAACATCACCCCAACAACGCTATTGCCTCCTCCCTTTACCCTTATAACGGCAACATGCCATCTGTGCACGGAGGCCAGTTGGTGATTCGCGACCCTCAGCCGCCGCAGCATCAGATCTTGGAAGCTCAGCAAATGGCTGCGGCTGTGGCCGCAAGAGAGCAGCAGGAGATGTTCAGGAGTTACGAGCATCAACAGCAGCAAGAATTCCTGAGGTTCAGTGGTGGGTTCGATGTGGGTTCCGTTTCTTCTGGTGGTGGTGGGTTCAGCCATGTGTCCCCAGCTTCTGCTGCAACGGCTGATCAGTTGTCTCCGTCATTGGCTTTGGGATCCTTCGACAACAGTTACCATATGCAGCAACCACAGCAAGGAGAACCCCATCCTCACCACCTTCCACTTCAGGCTCAGCTACTGCTTCCTCCGCAGCAGAAGCAAGCGCAACAACAAACCCATCAGTCACAACTGCCCCACCACCACCAGCAACAGTCGGAAAGCGAGGAGTGTAGGAGTGTCGGTCCATCTTGTTGA 897 0.5596 MSSSNSPCAACKFLRRKCTQECVYAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHKLRQIQVELNNAKKELATYIGPQAMQGMPTTILQHHPNNAIASSLYPYNGNMPSVHGGQLVIRDPQPPQHQILEAQQMAAAVAAREQQEMFRSYEHQQQQEFLRFSGGFDVGSVSSGGGGFSHVSPASAATADQLSPSLALGSFDNSYHMQQPQQGEPHPHHLPLQAQLLLPPQQKQAQQQTHQSQLPHHHQQQSESEECRSVGPSC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00033 298 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Gabi588g00033 298 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Gabi588g00033 298 MobiDBLite consensus disorder prediction 234 253 - -
Gabi588g00033 298 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 283 - -
Gabi588g00033 298 Coils Coil 86 106 - -
Gabi588g00033 298 MobiDBLite consensus disorder prediction 264 282 - -
Gabi588g00033 298 MobiDBLite consensus disorder prediction 264 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00033 Gabi-Chr588 436498 437394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00033 1 240 AS2 family AT5G66870 52.555 8.73e-76 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi588g00033 LOB 2.9e-41 No_clan