LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi588g00017	ATGTCATTTTCGTTATTCTCCACGCCGCAGCAACAGCAACAGCAACCGCAACAGCAACTGTTTCAACCACAGCAGCAGTCTCCTTTCCAGCAGAGTAGTTTGTTCCTTCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAATTTCAAGCTCAACAACAGCAACAGCAACAGCAACAACAGCAGCAGCAGCAACCGCAGCTGTTCTTGTACACTAACGATAGAACTCCCGCTAGTTATAGTACCAATTGGGCGGATCTACATCCTGATTCCCAGAAGCTTCTCCTTCTTATCGAGGGGCGGATATTGGAGTATAGGGACGAAAGTCAGAGACTAGATCAGAGTAATCGTCTGTATGATTCTTCAGTTTCGAACGATGGATTTGAGCTTGATGCTAGCCATATTGTTCAGGAACTTGGTGGAATTAGCACTGCTATGGAACGACAGAAAACTTTGCTGCAGGAACTGATGTCCGTTGTTAAGGATATGTTACACAACACAGAGGTTGCAGTTCGTTCCTTTATGATGCTACGTCCAAGATTCCTTCATCCCAGTGGGGGTGCATCAAGTGCCACTGCCCCATCACAGACTCCTGGGGCAAATTTAACACCTAGTTCGAGTAGCCAACCAATGGGTACATCTATAGTGCCTGTTTTTGATTTCTATAGCGGTCTTCCAAAGAAACCATCACCCTTTTTTCAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGCCATCAATGGATTGAGGAGTTGGAACAGCTGCTTCTCTTTGACAGTGAGAGAAATACTTCCAGTAATGGATCCTCGTTATTGCAATCCCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCTGCAAAGGTGGAGAGCATTCATCAGTACATTGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCGGGGGGAGGTGAATGATCCATTTCTAGAAGCTGATCGGCGAGAAACTGCAAGACAAGAAGCTGCTTCAAAAAGAGTTCATCCAACGTTGCATTTACCTGCAAATTCACAACCCTTAACTCAAGTTGCTGGTTTGTTTTCCAGTTCAGTAACTCAAGGGGCGTTGATTGCCCCGCAGACATCTGCAGCAACTTCATCTTTGTCATCAGGAAGTGGTTTCTCTCTTTTTAGCACGCCTTCTTCTGCTCCATCATCTTCTATGCCATCTTCTTTGTTTACAACACCAATAACTCCTGCTCCAGGATCATCTTGGTTTGGATCATCTACTGCTACACCTCAAACCTCACTTTTTGGTCCTTCATCATCATCCTTACCTGGTCCTGCATCAACTCCCTCTCTGTTTAGTAATACTGCTCCATTGTTTAGTACAACTCCGGCTGCAGGTTCACTCTTTTCAACTCCATTTGTTTCAGGTGCTGCAACAGGATCAGGGGCAAGCTTTGGGCATGGATCAAAAAATCCACGGCCAAAATCCAGAACTGCCCGACGGTAA	1509	0.452	MSFSLFSTPQQQQQQPQQQLFQPQQQSPFQQSSLFLQQQQQQQQQQQQQQQQFQAQQQQQQQQQQQQQQPQLFLYTNDRTPASYSTNWADLHPDSQKLLLLIEGRILEYRDESQRLDQSNRLYDSSVSNDGFELDASHIVQELGGISTAMERQKTLLQELMSVVKDMLHNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGANLTPSSSSQPMGTSIVPVFDFYSGLPKKPSPFFQQTVLRFEKYLGECHQWIEELEQLLLFDSERNTSSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPLTQVAGLFSSSVTQGALIAPQTSAATSSLSSGSGFSLFSTPSSAPSSSMPSSLFTTPITPAPGSSWFGSSTATPQTSLFGPSSSSLPGPASTPSLFSNTAPLFSTTPAAGSLFSTPFVSGAATGSGASFGHGSKNPRPKSRTARR	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi588g00017	502	MobiDBLite	consensus disorder prediction	325	344	-	-
	Gabi588g00017	502	PANTHER	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	6	490	IPR024882	GO:0005643\|GO:0006913\|GO:0008139\|GO:0017056
	Gabi588g00017	502	MobiDBLite	consensus disorder prediction	1	33	-	-
	Gabi588g00017	502	Coils	Coil	36	66	-	-
	Gabi588g00017	502	MobiDBLite	consensus disorder prediction	480	502	-	-
	Gabi588g00017	502	MobiDBLite	consensus disorder prediction	189	214	-	-
	Gabi588g00017	502	MobiDBLite	consensus disorder prediction	192	214	-	-
	Gabi588g00017	502	MobiDBLite	consensus disorder prediction	325	353	-	-
	Gabi588g00017	502	Gene3D	-	232	322	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi588g00017	72	502	NAC Transcription Factor Family	AT4G37130	63.470	1.51e-180	514

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi588g00017	K14307		-	gmx:100776992	672.159