Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00010 ATGTCTTATGTTACAAAATGTTTCATGTGGTTATCTTTATTAATCAGCACGATGACGATCTTGTCAAAGCCTGCAGTGTCTTCAAATATCATCAGGTCTTTGCCAGGGTTTTCTGGTTCCCTTCCTTTCAAATTAGAGACTGGATACATAGGTGTGGGTGAAGATGAAGTTGTGCAGCTGTTTTATTACTTTATTGAATCAGAAGGAAACCCAACAGAGGATCCTTTGGTACTCTGGATGAGTGGTGGCCCAGGATGCTCTAGCTTGTGCGGGCTTTGGTTTGAAATAGGCCCTCTGAAGTTCAATATGGTGGAGTATAATGGAAGTTTGCCAACCTCTTCTCTCAATCCACACTCATGGACAAAGGTTTCAAGTATAATCTTTATTGATGCACCTGTTGGCGCTGGATTCTCATATTCAAGAACCTTGGAAGGGGCTAACTTTACAGATAAAATCCATGCCCAACACTGTCACAATTTCATGAGAAAGTGGTTGGCCGGTCACCCGAAATTTATTGCTAATCCAGTCTACATTGCTGGTGACTCATATTCTGGCATGCCTGTACCAATTGTTGTTAAATATATTTCAGATGGAAACGAAGCTGGAGATAAGCCAAAAATAAATATAAAAGGATATGTTCTTGGAAACCCAGCAACAGATCGAAAATTTGATTGGAATTCTAGGATTCCATTTGCTCATCGCACAGCTCTTATTTCTGACAAACTCTACAAGTCAGCCAGAATGACGTGCAAAGGGGAGTATGTGATAGTGAAGAAAGATAATCTACCATGTCAAAAGAATCTCGAAGCTATCTCAGAGCGAACAGGTGATATAAATATGGAACATGTCTTAGAGCCTAAATGTCCGGCTGACGAGAAAATTCCAGAAAATAGGATGGATGATCGGAGGATTCTTCAAGAAAAATATAGGGATTTGTTGCTTTCCCCAGAGCAAATCTTACAATTTGGGTGTAGGAATTATGAGAATTTATTGCTGCATGTTTGGGCCAACGATGTTCATGTTCAAAAGGCGCTGCATGTCCGTATGGGAACTGTGAACGCTTGGATAAGGTGTAACCCCGGCATAATTTACACAAAAGATGTTCAAAGTTCAATTGCCTATCATCGTTATCTCAGAACCAAATATTTCCGGGCTCTTATATACAGCGGTGACCATGACATGACGATACCATACTTGGGAACTCTCTGGTGGCTCAATTCTATGAACTCTACCATTTTGGATGATTGGAGACCTTGGATCGTCGGTGATCTAGTTGCAGGGTATATACGAGAGTACTCCAACTATATCACTTTTGCCACTGTGAAGGCAAGTGGTGCTGGTCACACAGCCCCAGAGTATATGCCAAAGGAGTGCTTTGAAATGTTCAAGAGGTGGATCTCTCACGAGCCTTTGTGA 1416 0.4145 MSYVTKCFMWLSLLISTMTILSKPAVSSNIIRSLPGFSGSLPFKLETGYIGVGEDEVVQLFYYFIESEGNPTEDPLVLWMSGGPGCSSLCGLWFEIGPLKFNMVEYNGSLPTSSLNPHSWTKVSSIIFIDAPVGAGFSYSRTLEGANFTDKIHAQHCHNFMRKWLAGHPKFIANPVYIAGDSYSGMPVPIVVKYISDGNEAGDKPKINIKGYVLGNPATDRKFDWNSRIPFAHRTALISDKLYKSARMTCKGEYVIVKKDNLPCQKNLEAISERTGDINMEHVLEPKCPADEKIPENRMDDRRILQEKYRDLLLSPEQILQFGCRNYENLLLHVWANDVHVQKALHVRMGTVNAWIRCNPGIIYTKDVQSSIAYHRYLRTKYFRALIYSGDHDMTIPYLGTLWWLNSMNSTILDDWRPWIVGDLVAGYIREYSNYITFATVKASGAGHTAPEYMPKECFEMFKRWISHEPL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00010 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 455 IPR001563 GO:0004185|GO:0006508
Gabi588g00010 471 SUPERFAMILY alpha/beta-Hydrolases 31 470 IPR029058 -
Gabi588g00010 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Gabi588g00010 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Gabi588g00010 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Gabi588g00010 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Gabi588g00010 471 Gene3D alpha/beta hydrolase 25 298 IPR029058 -
Gabi588g00010 471 FunFam Serine carboxypeptidase-like 19 24 294 - -
Gabi588g00010 471 Gene3D - 324 471 - -
Gabi588g00010 471 FunFam Carboxypeptidase 322 471 - -
Gabi588g00010 471 Pfam Serine carboxypeptidase 35 467 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00010 Gabi-Chr588 212840 216425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00010 335 471 Calmodulin-binding Proteins AT2G22960 53.285 1.65e-45 155