Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00009 ATGTCTTATGTTACAAAATGTTTCATGTGGTTATCTTTATTAATCAGCACGATGACGATCTTGTCAAAGCCTGCAGTGTCTTCAAATATCATCAGGTCTTTGCCAGGGTTTTCTGGTTCCCTTCCTTTCAAATTAGAGACTGGATACATAGGTGTGGGTGAAGATGAAGTTGTGCAGCTGTTTTATTACTTTATTGAATCAGAAGGAAACCCAACAGAGGATCCTTTGGTACTCTGGATGAGTGGTGGCCCAGGATGCTCTAGCTTGTGCGGGCTTTGGTTTGAAATAGGCCCTCTGAAGTTCAATATGGTGGAGTATAATGGAAGTTTGCCAACCTCTTCTCTCAATCCACACTCATGGACAAAGGTTTCAAGTATAATCTTTATTGATGCACCTGTTGGCGCTGGATTCTCATATTCAAGAACCTTGGAAGGGGCTAACTTTACAGATAAAATCCATGCCCAACACTGTCACAATTTCATGAGAAAGTGGTTGGCCGGTCACCCGAAATTTATTGCTAATCCAGTCTACATTGCTGGTGACTCATATTCTGGCATGCCTGTACCAATTGTTGTTAAATATATTTCAGATGGAAACGAAGCTGGAGATAAGCCAAAAATAAATATAAAAGGATATGTTCTTGGAAACCCAGCAACAGATCGAAAATTTGATTGGAATTCTAGGATTCCATTTGCTCATCGCACAGCTCTTATTTCTGACAAACTCTACAAGTCAGCCAGAATGACGTGCAAAGGGGAGTATGTGATAGTGAAGAAAGATAATCTACCATGTCAAAAGAATCTCGAAGCTATCTCAGAGCGAACAGGTGATATAAATATGGAACATGTCTTAGAGCCTAAATGTCCGGCTGACGAGAAAATTCCAGAAAATAGGATGGATGATCGGAGGATTCTTCAAGAAAAATATAGGGATTTGTTGCTTTCCCCAGAGCAAATCTTACAATTTGGGTGTAGGAATTATGAGAATTTATTGCTGCATGTTTGGGCCAACGATGTTCATGTTCAAAAGGCGCTGCATGTCCGTATGGGAACTGTGAACGCTTGGATAAGGTGTAACCCCGGCATAATTTACACAAAAGATGTTCAAAGTTCAATTGCCTATCATCGTTATCTCAGAACCAAATATTTCCGGGCTCTTATATACAGCGGTGACCATGACATGACGATACCATACTTGGGAACTCTCTGGTGGCTCAATTCTATGAACTCTACCATTTTGGATGATTGGAGACCTTGGATCGTCGGTGATCTAGTTGCAGGGTATATACGAGAGTACTCCAACTATATCACTTTTGCCACTGTGAAGGGTGCTGGTCACACAGCCCCAGAGTATATGCCAAAGGAGTGCTTTGAAATGTTCAAGAGGTGGATCTCTCACGAGCCTTTGTGA 1410 0.4142 MSYVTKCFMWLSLLISTMTILSKPAVSSNIIRSLPGFSGSLPFKLETGYIGVGEDEVVQLFYYFIESEGNPTEDPLVLWMSGGPGCSSLCGLWFEIGPLKFNMVEYNGSLPTSSLNPHSWTKVSSIIFIDAPVGAGFSYSRTLEGANFTDKIHAQHCHNFMRKWLAGHPKFIANPVYIAGDSYSGMPVPIVVKYISDGNEAGDKPKINIKGYVLGNPATDRKFDWNSRIPFAHRTALISDKLYKSARMTCKGEYVIVKKDNLPCQKNLEAISERTGDINMEHVLEPKCPADEKIPENRMDDRRILQEKYRDLLLSPEQILQFGCRNYENLLLHVWANDVHVQKALHVRMGTVNAWIRCNPGIIYTKDVQSSIAYHRYLRTKYFRALIYSGDHDMTIPYLGTLWWLNSMNSTILDDWRPWIVGDLVAGYIREYSNYITFATVKGAGHTAPEYMPKECFEMFKRWISHEPL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00009 469 FunFam Carboxypeptidase 323 468 - -
Gabi588g00009 469 SUPERFAMILY alpha/beta-Hydrolases 31 468 IPR029058 -
Gabi588g00009 469 FunFam Serine carboxypeptidase-like 11 25 469 - -
Gabi588g00009 469 Gene3D alpha/beta hydrolase 25 298 IPR029058 -
Gabi588g00009 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Gabi588g00009 469 Pfam Serine carboxypeptidase 35 465 IPR001563 GO:0004185|GO:0006508
Gabi588g00009 469 Gene3D - 324 469 - -
Gabi588g00009 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Gabi588g00009 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Gabi588g00009 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Gabi588g00009 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Gabi588g00009 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 453 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00009 Gabi-Chr588 212840 216425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00009 335 469 Calmodulin-binding Proteins AT2G22960 54.074 2.00e-47 160