Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00005 ATGCTATTGTCTCCCATCTTCAGTTGCGGAACGAGGACCATGGAGAGAACAGCAGAGTCATTTAGTCTTAGTTTAACAAAGTCAATGTCTTATGTTACAAAATGTTTCATGTGGTTATCTTTTTTAATCAGCACGATGACGATCTTGTCAAAGCCTGCAGAGTCTTCAAATATCATCAGGTCTTTGCCAGGGTTTTCTGGTTCCCTTCCTTTCAAATTAGAGACTGGATACATAGGTGTGGGTGAAGATGAAGTTGTGCAGCTGTTTTATTATTTTGTTGAATCAGAAGGAAATCCAACAGAGGATCCTTTGGTACTCTGGATGACCGGTGGCCCAGGATGCTCTGGCTTATGCGGGCTTTGGTTTGAAATAGGCCCTCTGAAGTTCAATATGGTGAAGTATAATGGAAGTTTGCCAACATTTTCTCTCAATCAACACTCATGGACAAAGGTTTCAAGTATGATCTTTATTGATGCACCTGTTGGCACTGGATTCTCATATTCAAGAACCTTGGAAGGAGCTAATATTACAGATAAAATAAATGCCCAACACTGTCACGATTTCATGAGAAAGTGGTTGACCGGTCACCCCAAATTTATTGCTAATCCAGTCTACATTGGTGGTGACTCATATTCTGGCATTCCTGTGCCAATTGTTGTTAAATATATTTCAGATGGAAACGAAGATGGAGAAAAGCCAGAAATAAATATAAAAGGTTATGTGCTTGGGAACCCAATTACGGATCCAAAATTTGATCGGAATTCTAAGATTCCATTCGCTAATCGCATGGCTCTTATTTCTGACGAACTCTACAAGTCAGCAAAAATGACATGCAAAGGGGAGTATGTGATAGTGAAGAAAGATAATCTACCATGTCAAAAGGATCTCCAAGCTATCTCAGAGCGAACAGTTGACATAAATATGGGACACGTCTTAGAGCCTAAATGTCCGTCTGACAGGAAATTTCCAGAAAATAGGATGGATGATCGGAGGATTCTTCAAGAAAAATATAGGGATTTGTTGCTTTCTCCCGTGCAAAGTTTAGAGTTTGGGTGTAGGAATTATAAGAATTTATTGCTTCATGTATGGGCCAACGATGTTCATGTTCAAAAGGCGCTGCATGTCCGTATGGGAACTGTGAACGCTTGGATAAGATGTAACGACAACATGTTTTACACAAAAGATGTCGAAAGTTCAATTGCCTATCATCGTTATCTAAGAACCAAACATTGCCGAGCACTTATATACAGCGGTGACCATGACATGGTTGCGCCATACTTGGGAACTCTCCGGTGGCTCAATTCTCTGAACTCTACCATTGTGGATGATTGGAGACCTTGGGTCGTTAGCGATCAAATTGCAGGGTATATACGAGAGTACTCCAACTATGTCACTTTTGCCACTGTGAAGGGTGCTGGTCACGTTGCCACTGAGTTCATGCCACAGGAATGCTTTGAAATGTTCAAGAGGTGGATCTCTCATGAGCCTTTGTGA 1494 0.411 MLLSPIFSCGTRTMERTAESFSLSLTKSMSYVTKCFMWLSFLISTMTILSKPAESSNIIRSLPGFSGSLPFKLETGYIGVGEDEVVQLFYYFVESEGNPTEDPLVLWMTGGPGCSGLCGLWFEIGPLKFNMVKYNGSLPTFSLNQHSWTKVSSMIFIDAPVGTGFSYSRTLEGANITDKINAQHCHDFMRKWLTGHPKFIANPVYIGGDSYSGIPVPIVVKYISDGNEDGEKPEINIKGYVLGNPITDPKFDRNSKIPFANRMALISDELYKSAKMTCKGEYVIVKKDNLPCQKDLQAISERTVDINMGHVLEPKCPSDRKFPENRMDDRRILQEKYRDLLLSPVQSLEFGCRNYKNLLLHVWANDVHVQKALHVRMGTVNAWIRCNDNMFYTKDVESSIAYHRYLRTKHCRALIYSGDHDMVAPYLGTLRWLNSLNSTIVDDWRPWVVSDQIAGYIREYSNYVTFATVKGAGHVATEFMPQECFEMFKRWISHEPL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00005 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 59 477 IPR001563 GO:0004185|GO:0006508
Gabi588g00005 497 SUPERFAMILY alpha/beta-Hydrolases 59 496 IPR029058 -
Gabi588g00005 497 Gene3D alpha/beta hydrolase 52 326 IPR029058 -
Gabi588g00005 497 FunFam Carboxypeptidase 351 496 - -
Gabi588g00005 497 Pfam Serine carboxypeptidase 63 493 IPR001563 GO:0004185|GO:0006508
Gabi588g00005 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 156 IPR001563 GO:0004185|GO:0006508
Gabi588g00005 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 167 IPR001563 GO:0004185|GO:0006508
Gabi588g00005 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Gabi588g00005 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 192 217 IPR001563 GO:0004185|GO:0006508
Gabi588g00005 497 FunFam Serine carboxypeptidase-like 11 53 497 - -
Gabi588g00005 497 Gene3D - 352 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00005 Gabi-Chr588 62790 69990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00005 53 82 Calmodulin-binding Proteins AT2G22960 63.333 3.12e-06 45.8