Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi588g00003 ATGGTGAAGTATAATGGAAGTTTGCCAACATTTTCTCTCAATCAACACTCATGGACAAAGGTTTCAAGTATGATCTTTATTGATGCACCTGTTGGCACTGGATTCTCATATTCAAGAACCTTGGAAGGAGCTAATATTACAGATAAAATAAATGCCCAACACTGTCACGATTTCATGAGAAAGTGGTTGACCGGTCACCCCAAATTTATTGCTAATCCAGTCTACATTGGTGGTGACTCATATTCTGGCATTCCTGTGCCAATTGTTGTTAAATATATTTCAGATGGAAACGAAGATGGAGAAAAGCCAGAAATAAATATAAAAGGTTATGTGCTTGGGAACCCAATTACGGATCCAAAATTTGATCGGAATTCTAAGATTCCATTCGCTAATCGCATGGCTCTTATTTCTGACGAACTCTACAAGTCAGCAAAAATGACATGCAAAGGGGAGTATGTGATAGTGAAGAAAGATAATCTACCATGTCAAAAGGATCTCCAAGCTATCTCAGAGCGAACAGTTGACATAAATATGGGACACGTCTTAGAGCCTAAATGTCCGTCTGACAGGAAATTTCCAGAAAATAGGATGGATGATCGGAGGATTCTTCAAGAAAAATATAGGGATTTGTTGCTTTCTCCCGTGCAAAGTTTAGAGTTTGGGTGTAGGAATTATAAGAATTTATTGCTTCATGTATGGGCCAACGATGTTCATGTTCAAAAGGCGCTGCATGTCCGTATGGGAACTGTGAACGCTTGGATAAGATGTAACGACAACATGTTTTACACAAAAGATGTCGAAAGTTCAATTGCCTATCATCGTTATCTAAGAACCAAACATTGCCGAGCACTTATATACAGCGGTGACCATGACATGGTTGCGCCATACTTGGGAACTCTCCGGTGGCTCAATTCTCTGAACTCTACCATTGTGGATGATTGGAGACCTTGGGTCGTTAGCGATCAAATTGCAGGGTATATACGAGAGTACTCCAACTATGTCACTTTTGCCACTGTGAAGGGTGCTGGTCACGTTGCCACTGAGTTCATGCCACAGGAATGCTTTGAAATGTTCAAGAGGTGGATCTCTCATGAGCCTTTGTGA 1104 0.4076 MVKYNGSLPTFSLNQHSWTKVSSMIFIDAPVGTGFSYSRTLEGANITDKINAQHCHDFMRKWLTGHPKFIANPVYIGGDSYSGIPVPIVVKYISDGNEDGEKPEINIKGYVLGNPITDPKFDRNSKIPFANRMALISDELYKSAKMTCKGEYVIVKKDNLPCQKDLQAISERTVDINMGHVLEPKCPSDRKFPENRMDDRRILQEKYRDLLLSPVQSLEFGCRNYKNLLLHVWANDVHVQKALHVRMGTVNAWIRCNDNMFYTKDVESSIAYHRYLRTKHCRALIYSGDHDMVAPYLGTLRWLNSLNSTIVDDWRPWVVSDQIAGYIREYSNYVTFATVKGAGHVATEFMPQECFEMFKRWISHEPL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi588g00003 367 FunFam Carboxypeptidase 221 366 - -
Gabi588g00003 367 Pfam Serine carboxypeptidase 7 363 IPR001563 GO:0004185|GO:0006508
Gabi588g00003 367 SUPERFAMILY alpha/beta-Hydrolases 5 366 IPR029058 -
Gabi588g00003 367 Gene3D alpha/beta hydrolase 1 366 IPR029058 -
Gabi588g00003 367 PRINTS Carboxypeptidase C serine protease (S10) family signature 27 37 IPR001563 GO:0004185|GO:0006508
Gabi588g00003 367 PRINTS Carboxypeptidase C serine protease (S10) family signature 334 347 IPR001563 GO:0004185|GO:0006508
Gabi588g00003 367 PRINTS Carboxypeptidase C serine protease (S10) family signature 14 26 IPR001563 GO:0004185|GO:0006508
Gabi588g00003 367 PRINTS Carboxypeptidase C serine protease (S10) family signature 62 87 IPR001563 GO:0004185|GO:0006508
Gabi588g00003 367 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 347 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi588g00003 Gabi-Chr588 62790 69990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi588g00003 233 367 Calmodulin-binding Proteins AT2G22960 54.074 2.59e-49 162