Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi573g00005 ATGGATTATCCAATCCTTCACTTATTAGCCATTATCCTCTTTATCCTCTTCTTGTTTGTGGCACTAAAAATTGGGAGGAATCTCAAGAAAAGTGACTCAACTCCAAATATACCCCCAGGGCCATGGAAGCTACCAATTATAGGACATATACCCCATCTTGTTACATCTACACCACATCGAAAATTAAAAAAATTGGCCAAAATTTATGGACCCTTGATGCATTTACAACTTGGAGAGGTCTTCACAATCGTTGTTTCCTCACCAGAGTATGCTAGGGAGGTAATGAAAACCCATGATCTCATCTTTGCATCAAGGCCTCATATTCTAGCTACAGAAATATTGGCTTATGAATCCACAAATATCGCTTTCGCACCTTACGGAAATTATTGGAGACAACTAAGAAAAATATGCACAATGGAGCTTTTCACCCAAAAGCGTGTGAGTTCATTCCAGCCACTAAGAGAAGAAGAGCTAACCAATCTCATCAAAAGGATTGATTCACAGAAAGGATCACCAATCAACCTTACTCAAGCAGTAACTTCATCAATATTTACTATCCATTCAAGAGCTGCGTTTGGCAAGAAATGCAAAGACCATGAAGAATTCATATCAGCGGCAAGAGAAGCAATAACAGTTGCTGGAGGTTTTAACATAGGAGATTTGTTTCCTTCTGCTAAATGGCTTCAACTTGTTACTGGTTTTAGGCCTAAGCTGACAAGGTTGCATCGGAAAGTTGATCAAATACTGGAAAACATCATCACTGAACATAAAGAGAAGTCAAAACACAAAGAAGGCCATGATGATGCAGTGGAAGATCTGATAGATGTTCTCTTAAAATTTCAGGATGGTTATGATAGCAACCCGGATATTTGCTTAACCAATAACAACATAAAGGCTATAGCCCTGGACATGTTTACGGGAGGTGAGTCAGCATCAACTACCGTGGATTGGGCAATGGCAGAGATGATCAAGGATCCAAGAGTAATGAAGAAAGCACAAGATGAGGTGAGAGATGTATTCAATATGAAAGGAATGGTTGATGAAATTTGCATCAATAAACTCAAATATTTGAAATCAGTTGTCAAAGAGACCATGAGGTTACACCCTCCAGGTCCTCTTTTACTTCCAAGAGAATGTGGGCAAGCTTGTGAGATTAATAAGTATCATATACCAGTCAAAAGTAAGGTCATTGTCAATGCTTGGGCAATTGGAAGAGATCCAAAGTACTGGACTGAACCAAAGAGGTTTTATCCAGAGAGATTCATCAATAGCTCAATTGATTATAGAGGGAGTAATTTTGAGTACATTCCTTTTGGAGCTGGTAGAAGAATATGTCCAGGTATCACACTTGGTGTAATAAATATTGAGCTGACCCTTGCATTGTTGTTGTTTCACTTTGATTGGAAGATTCCTAATGGAATGAAAAGTGAAGACGTGAATATGACTGAGCAATTTGGAGCGACTGTTAGAAGAAAATATGGCTTGTACCTAATACCAGTTCCATTCATAGCATTCTAG 1518 0.3867 MDYPILHLLAIILFILFLFVALKIGRNLKKSDSTPNIPPGPWKLPIIGHIPHLVTSTPHRKLKKLAKIYGPLMHLQLGEVFTIVVSSPEYAREVMKTHDLIFASRPHILATEILAYESTNIAFAPYGNYWRQLRKICTMELFTQKRVSSFQPLREEELTNLIKRIDSQKGSPINLTQAVTSSIFTIHSRAAFGKKCKDHEEFISAAREAITVAGGFNIGDLFPSAKWLQLVTGFRPKLTRLHRKVDQILENIITEHKEKSKHKEGHDDAVEDLIDVLLKFQDGYDSNPDICLTNNNIKAIALDMFTGGESASTTVDWAMAEMIKDPRVMKKAQDEVRDVFNMKGMVDEICINKLKYLKSVVKETMRLHPPGPLLLPRECGQACEINKYHIPVKSKVIVNAWAIGRDPKYWTEPKRFYPERFINSSIDYRGSNFEYIPFGAGRRICPGITLGVINIELTLALLLFHFDWKIPNGMKSEDVNMTEQFGATVRRKYGLYLIPVPFIAF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi573g00005 505 PANTHER OS08G0105600 PROTEIN 61 501 - -
Gabi573g00005 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gabi573g00005 505 FunFam Cytochrome P450 71D8 30 499 - -
Gabi573g00005 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 CDD CYP71-like 69 495 - -
Gabi573g00005 505 Pfam Cytochrome P450 38 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 Gene3D Cytochrome P450 28 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00005 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi573g00005 Gabi-Chr573 141285 143153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi573g00005 9 503 Cytochrome P450 AT3G26300 40.755 1.54e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi573g00005 - - gmx:102665189 773.081