Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi573g00003 ATGGAAGCAACATGGGCCACAACAAGTGCAGGCATAATTATCACTGTGATAGTTGCTGTGATATGGGCATGGAGGATGCTGAACTGGTTTTGGCTGAGGCCAAAGAGGCTTGAGAGGCTGCTAAGGGAACAAGGCCTTAAAGGCAATCCATACAGGGTTTTGGTTGGAGATTTAATGGATATTCGGAAGATGCAAAAGGAAGTAATGTCCAAACCCATTAATCTTTCTGATGATATAGTACCCCGTGCGTTCTCCCATGTCCAACACAGTGTCAACAAACATGGCAAGAATTCTTTTATTTGGATGGGACCAATACCAAGGGTGACCCTCACAGATCCTGAGCTAATAAAAGATGTACTTAACAAGAACTATGACTTCCCGAAGCCTAATATTGTCAATCCACTTGTCAAGTTACTAGCTACTGGTCTTGCAAACCATGAGGGAGAAAAGTGGAGCAAGCACAGAAGGATAATCAACCCTGCATTCAATTTAGAAAAATTGAAGATTATGCTACCAATATTTTTCAAAAGTTGCAATGATCTGATTAGCAAATGGGAGGGAATGTTATCTCTAGATGGATCCTGTGAAATGGATGTATGGCCTTTCCTTCAGAATTTGGCTAGAGACGTTATTTCTAGAGCAGCATTTGGAAGCAGTTATGAAGAAGGAAGAAGAATATTTGAGCTTCAAAAAGAGCAAACTGAACTTACAATCAAAGTTGCAATGAAAGCTTACGTCCCTGGATGGAGGTTTGTACCTAATTCTACCCATCGGAGGATGAAGCAAATTTACAGAGATCTAAATGCTTCGCTAAAGGGTATGATTAACAAGAAAGAGAAAGCAATGAAGGCAGGTGAAGCAACTAAGAATGACTTATTAGGAATACTTTTGGAGTCAAATCACAAGGAAGTTCAAGAACAAGGAAACAGTAAGAATGTTGGATTGAATCTTGAAGATATAATCGACGAATGCAAGCTATTCTACTTTGCAGGGCAGGAAACCACTTCAGTTTTGCTTGTTTGGACAATGGTGTTATTGAGTAGGTACCCTGATTGGCAAGCACGTGCAAGGGATGAAGTCTTACAAGTCTTTGGCAACAATAAACCAGATTTTGATAGGCTGAGTCACCTTAAGATTGTCACCATGATTTTGTATGAGGTTCTTAGGTTTTACCCACCAGTACTTGGGCTTACTCGAACTGTTCACAAAGATATGAAACTTGGAAACCTGACATTACCTGCTGGAGTGGAGGTTTCCATACCAATAGTTTTGGTTCACCATGACTGTGAACTCTGGGGAAATGATGCTAAGGAGTTCAATCCTGAGAGATTTTCTGAAGGAGTTTTAAAGGCAACAAATGGCAGAGTTTCATTTTTACCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTTTCCATGTTAGAAGCAAAGATGGCTTTATCACTGATTTTACATCGTTTCTCATTTGAACTTTCACCGGCTTATGCTCATGCTCCTATTTCAGTAATTACTCTTCAGCCACAATATGGTGCTCATATCATTTTACGTAAAGTGGAACTATGA 1569 0.399 MEATWATTSAGIIITVIVAVIWAWRMLNWFWLRPKRLERLLREQGLKGNPYRVLVGDLMDIRKMQKEVMSKPINLSDDIVPRAFSHVQHSVNKHGKNSFIWMGPIPRVTLTDPELIKDVLNKNYDFPKPNIVNPLVKLLATGLANHEGEKWSKHRRIINPAFNLEKLKIMLPIFFKSCNDLISKWEGMLSLDGSCEMDVWPFLQNLARDVISRAAFGSSYEEGRRIFELQKEQTELTIKVAMKAYVPGWRFVPNSTHRRMKQIYRDLNASLKGMINKKEKAMKAGEATKNDLLGILLESNHKEVQEQGNSKNVGLNLEDIIDECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARARDEVLQVFGNNKPDFDRLSHLKIVTMILYEVLRFYPPVLGLTRTVHKDMKLGNLTLPAGVEVSIPIVLVHHDCELWGNDAKEFNPERFSEGVLKATNGRVSFLPFGWGPRICIGQNFSMLEAKMALSLILHRFSFELSPAYAHAPISVITLQPQYGAHIILRKVEL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi573g00003 522 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 SUPERFAMILY Cytochrome P450 83 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Gabi573g00003 522 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 Gene3D Cytochrome P450 31 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 513 - -
Gabi573g00003 522 Pfam Cytochrome P450 87 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi573g00003 522 FunFam Cytochrome P450 734A1 31 521 - -
Gabi573g00003 522 CDD CYP72 84 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi573g00003 Gabi-Chr573 77226 82749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi573g00003 10 520 Cytochrome P450 AT3G14690 57.393 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi573g00003 - K23809 gmx:100777623 840.491