Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi56g00006 ATGGGGTTTTTGTTGAAAGAAGCTTTGAAGACTCTGTGCGCTCGGAATCAGTGGTCTTATGCCGTGTTCTGGAAGATCGGCTGCAACAATTCCAAGCTGTTAATCTGGGAAGATTGCTACTATGAACCATTGCCATCTTCTTTCCCTTCACGCATTGTTGGGACGTCTAATTTGCCCTACCGAGATGGGGAAGGATGCTGGTTTTCTTCCGAGTCTCAGCTACGGATTCAGGAGGAGGACAGAGTCTGTTCATTGATTAACAAAATGATGGTGAATAATTCAGTCAATATCTCTGGTGAAGGGATAATTGGACGGGCAGTATTTACAGGAAACCATCAGTGGATTCTTTTGAACAATTTTACTAGAGATGCATATCCACCAGAGGTATTAACCGAGGTGCATGACCAATTTTCAGCTGGAATGCAGACAATAGCGGTTATTCCTGTCCTTCCCCACGGGGTTGTTCAACTTGGTTCTTTCTTGCCTATAATGGAAAATATGGCATTCGTGAGTGATGTGAAGAGCTTGATCTTGCAATTGGGATGTGTTCCTGGTGCCCTTCTATCTGAAGACTATTCAGCAAAAAATTATACTGAAAGACTTGCGGGACCTGTGACTGTTGGTGTGCCTGTGTCTGTTGATCCACCAGTCATTACGTCAAACTGCACTCACTCAGTAGCTAATGGTTCTAACCAACCAAGTAATTCATATCATGCTTCAAGGTCTATTGCTCAACCACCTCATCCTTTAAGGGGAGAAATAAATAATTACCAGGGTTCTGTATTGACACCTCAAACCCATAACCTAAATCAGATATTTGATAACCTTTGCCAACCAAAGGCTCATTCAATGATTAAAACAAGTGTCACTGGTCAACGAGAGAATACAGTTGTGGAGACTGAACCTGGAGTAATACCTGCAAATCTCGATTCCTCTATGTCACAGCGTTCTGTTTCATATAATGCAAGGCCTGCGTTCAATCAATTAGCTGGTTTCGGTCAATCAAGTCTGAGTGACTGCAGCGTTAAATATATGGAACAACAAATCTTATCAGGTGTTGGGAGGCGGAGTCATGTTAATCCTACTATGAATCCATCAAGTACCGTAAATATGTCTCAACTGAAAACAGATGGAGGCCAAATTTTTGAACAGAGCCAGAGTTCTGTTAGCACTTCCCTAATTGGAGGAATCCCAATACATAGCAGGATGGGTAATCTTCTGAGGACAAATATGATTAACTGCTCGGTTTCAAACCTTCCCAAAGTATCCAATGCTGATTTTTCTGGAACGCAAAAAGTTGGGTTTGGACTTCAAAATGATAATTCAACTGAAGCTGGGACTTATTCTCTGCCTAATTTGACTAGTCAATCATTTTCCAGTCACATGCATCTAGAAGGCCTTGATCAGAAGAATCTTCCTATAGATTTAAAACATGGTTTCAATGCTTTGGCTTCAACAGATCAAAATATAGATGATGATTTGCTTCAGGCCCTTAAGATCCCATCTCTCCATCTTGAGGAGCATGTGCCTATGAGTGATCGCATCCCCGGCTTTGTTCAAGATTGCTTCAATAAAGATGGTTCTAGTCAACATATGATGAAAGTGAATGCTAAACAAGAAGAAACTTGTATTCAACTTCCATCAGGAGATGACCTCTTTGATGTTCTAGGTGTGGATTTCAAAAGGAAACTACTGAATGGAAACTGGAATAAGCTATTCGCGGATGAATCAGATGCCAATACAGAAATTCTGGATAAAAAGGCAACATGTATGAATTTGCAGGGTATAATAGGTCATGAGAATAGTTTTTCAGCTAATGAAGCGATATCAGACAGTAGCATCTTCTCTGGGATGGGCACTGACCACCTCTTAGATGCTGTGGTGTCAAGGGCTCAATCTGCTGCAAAACTGAATTCTGATGAAATGTCTTGTCGGACAACAGTGACAAGGATTAATCCCACCTGTGTCCCCTCTCCTGCCTGCAAGCAGGTTATGTCTGATCATGGTGTCCAGGGTGGATTGTTTGATTTTCCTAAGACGGGGGTTAAAACTGGTGCTGTGGAAACTAGTTCTCTTAGGTGTAGCAAGGATGATACTGGAAACTGTTCTCAAACTACTTCCATATATGGGTCTCAACTTAGTTCATGGGTTGAGAATGGCAGCAATGTGAAGCGTGAAAATAGCGTTTCGACTGGATACTCTAAGCGGCCAGATGAAGTTTGCAAATCGAATCGTAAAAGGCTTAAACCTGGAGAGAACCCCAGGCCTCGCCCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGTTACGGGAAATTGTGCCAAATGGATCCAAATGTAGCATAGATGCACTTCTAGAACGAACCATCAAGCATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGATTGCTATTAAAAGATAACTTTGAAGGAGGAGCTACATGGGCATATGAGGTTGGCTCACAATCAATGGTTTGCCCTATCATAGTTGAAGATCTCAATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTGGAAATCGCTGACTTAATCAGAGGGTTAGGTTTAACCATCTTGAAGGGGGTTATGGAAGCTCGCAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTAACGAGGATGGAAATATTTATGTCCCTGGTTCGTCTTTTGGAGCAAACTGTAAAGGGTGGTGCATCTTCATCCAATGCTGTTGATAGCAACATGATGATTTATCATTCTTTCCCACAAGCTACCCAGATACCAGCAACTGGTAGGCCTAGTAGTTTGCAATGA 2886 0.4217 MGFLLKEALKTLCARNQWSYAVFWKIGCNNSKLLIWEDCYYEPLPSSFPSRIVGTSNLPYRDGEGCWFSSESQLRIQEEDRVCSLINKMMVNNSVNISGEGIIGRAVFTGNHQWILLNNFTRDAYPPEVLTEVHDQFSAGMQTIAVIPVLPHGVVQLGSFLPIMENMAFVSDVKSLILQLGCVPGALLSEDYSAKNYTERLAGPVTVGVPVSVDPPVITSNCTHSVANGSNQPSNSYHASRSIAQPPHPLRGEINNYQGSVLTPQTHNLNQIFDNLCQPKAHSMIKTSVTGQRENTVVETEPGVIPANLDSSMSQRSVSYNARPAFNQLAGFGQSSLSDCSVKYMEQQILSGVGRRSHVNPTMNPSSTVNMSQLKTDGGQIFEQSQSSVSTSLIGGIPIHSRMGNLLRTNMINCSVSNLPKVSNADFSGTQKVGFGLQNDNSTEAGTYSLPNLTSQSFSSHMHLEGLDQKNLPIDLKHGFNALASTDQNIDDDLLQALKIPSLHLEEHVPMSDRIPGFVQDCFNKDGSSQHMMKVNAKQEETCIQLPSGDDLFDVLGVDFKRKLLNGNWNKLFADESDANTEILDKKATCMNLQGIIGHENSFSANEAISDSSIFSGMGTDHLLDAVVSRAQSAAKLNSDEMSCRTTVTRINPTCVPSPACKQVMSDHGVQGGLFDFPKTGVKTGAVETSSLRCSKDDTGNCSQTTSIYGSQLSSWVENGSNVKRENSVSTGYSKRPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGSKCSIDALLERTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLEQTVKGGASSSNAVDSNMMIYHSFPQATQIPATGRPSSLQ 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi56g00006 961 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 955 IPR043561 GO:0003700|GO:0006355
Gabi56g00006 961 MobiDBLite consensus disorder prediction 722 763 - -
Gabi56g00006 961 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Gabi56g00006 961 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 748 797 IPR011598 GO:0046983
Gabi56g00006 961 MobiDBLite consensus disorder prediction 738 763 - -
Gabi56g00006 961 CDD bHLH_AtLHW_like 752 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi56g00006 Gabi-Chr56 98142 105205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi56g00006 550 955 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.285 1.89e-119 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi56g00006 - - aprc:113857443 1509.97