Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi562g00003 ATGAGTCTAAACTCTTCTAGTAGCGGAAGTGGAAGCGGTGGTGGAAGCAGTGGTAGTAGCAGCCCTTGTGGTGCTTGCAAGTTCTTGAGAAGGAAGTGTGTGCAAGGGTGCATCTTTGCTCCATACTTCGATTCTGAACAAGGTACAACCCATTTTGCGGCGGTGCACAAGGTGTTCGGAGCAAGCAACGTGTCCAAGCTCCTCCTTAATGTTCCGGTGCACCGGAGGCCCGATGCGGTGGTCACCATTTGTTATGAAGCACAGTCACGGCTGAGAGATCCTGTGTATGGTTGTGTTGCTCATATCTTTGCCCTTCAGCAACAGGTGATGAGTTTACAAGCAGAACTATCCTACTTACAAGGTCACCTTACCACATTGGAGGCACCCCAACAACCACCACCTCATTCACCGCAGCTTGCGGTGGCACAACCGATTTTTTCAATTGCCGACTTACCGTCCGCCACCGCGGTGGCTATGCCGGCCACCTATGATGTAACTTCACTTTTTGATCCAATGGGCCAAACTTCATGGGCCATGCAGCAAAGGGCCATGGACCCACGTCAATATTTGGGTGCTGCACCATCAAGCACAAGTGGTGATCTTCATCTTCATGGAGTGGCACGTGAGCTTTCACATAGACATGGTTCTCCACCTCCACCTCATGCACCATCCTCCAATGCCTCTTCATCTCTGTCGCTTTCTAAATGA 708 0.5085 MSLNSSSSGSGSGGGSSGSSSPCGACKFLRRKCVQGCIFAPYFDSEQGTTHFAAVHKVFGASNVSKLLLNVPVHRRPDAVVTICYEAQSRLRDPVYGCVAHIFALQQQVMSLQAELSYLQGHLTTLEAPQQPPPHSPQLAVAQPIFSIADLPSATAVAMPATYDVTSLFDPMGQTSWAMQQRAMDPRQYLGAAPSSTSGDLHLHGVARELSHRHGSPPPPHAPSSNASSSLSLSK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi562g00003 235 PANTHER LOB DOMAIN CONTAINING PROTEIN 18 145 - -
Gabi562g00003 235 MobiDBLite consensus disorder prediction 1 20 - -
Gabi562g00003 235 Pfam Lateral organ boundaries (LOB) domain 22 120 IPR004883 -
Gabi562g00003 235 MobiDBLite consensus disorder prediction 190 235 - -
Gabi562g00003 235 ProSiteProfiles LOB domain profile. 21 123 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi562g00003 Gabi-Chr562 51728 54678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi562g00003 25 228 AS2 family AT2G45420 59.641 1.38e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi562g00003 LOB 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi562g00003 K21994 - gmx:100777737 293.508