Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi556g00005 ATGGTTTGGGAATCAAGAAAGTGGGTGATACTCCTAGCATCAATATGGATACAAGCATTCACTGGGACAAACTTTGACTTCTCATCATACTCATCTGATCTCAAATCTGTTCTTGATATAACACAGCTTCAGCTGAATTATCTATCAGTGGCATCAGACATGGGAAAAGCATTTGGATGGTGTTCTGGGATTTCACTCATGTATTTCCCTTTGTGGGTGGTTATGTTCATGGCTGCTTTCATGGGACTTGTTGGTTATGGCCTTCAATGGCTTGTCATTATGAGACTCATCACCTTGCCTTATTTTGTGGTCTTTTTTCTATGCTTGATTGCTGGTTGTAGCATCTGTTGGTTCAACACCATCTGCTATGTCTTATGTGTGAAACATTTTGCAGCAAACCGTTCACTTGCATTATCATTAAGTATTAGTTTCAATGGTGTAAGTGCAGCTTTGTACACTCTCCTTGCCAATGCAATAAACTCAAGTGATGACACTCTTTATCTCTTACTCAATGCCATTGTTCCTGTACTCATTTCTTTACTAGTACTCTTCCCAATTCTCCACCAACCACAGCCTCAACCACATTCTGCTGATACCCTTCAAAGGGATTCCTTGGTTTTTCTCTGCCTCAACATCCTTGCCATTGTTACAGGCCTCTACCTCCTCTTCCTATATTCCTTCTCTTCTAACAGCGCCACCATGGCTCGTGTTATCCTTGCAGGTGCCATTTTCCTCCTTGTACTACTCTTGTTCTTGCCTGGCATTGTGTATTCTAGAGAATGGTCTTGCTTAACTTTCCCAACAAGCTTTTCCCTATACAATTCAAGGTTCAATGTTATTGACCCTGATGACCATGATCATGATCTTCACAAAGAACTCATTGGTGATGAGGACAATGCAAGGAATGGCAATGCTCAAAGTATAAGAGAAAAGAAGTGTTGTTTTGTGAATGTGTTGGAGAGAGAGCAGATTACAACGCTAGGGGAAGAGCATTCAATAAGGTTGCTAATGCGTAGATGGGACTTTTGGTTATACTACATTGCATATTTCTGTGGAGGAACAATTGGTTTGGTTTACAGCAACAACTTGGGACAAATTTCACAATCACTTGGACACAGTTCTCAGACTAGCTCTATTGTCACACTTTACTCCACATTTTCCTTCTTTGGTCGCCTTCTAGCAGCTGCACCTGACTTCTTGAGCGGGAAGATACACTTTGCAAGAACTGGATGGTTTGCAGCAGCCCTGGTTCCAACACCAATTGCATTCATTTTGTTGGCCATATCTGGCAGTGAAACAGCATTGCACATAGGAACCAGCTTGATTGGGCTAAGTTCTGGCTTTGTGTTTTCTGCAGCAGTATCTATTACATTAGAGCTATTTGGCCCAAACAGTGTTGGTGTGAACCACAATATCCTCATCACCAACATTCCTTTAGGCTCATGTCTTTATGGCCTTCTTGCAGCTTTGATTTATGACTCCAATGCAACAATGAACCCAACAAAGCACACAACAACAACATGGCTGCGTGAAATGTCCATGTGCATGGGGAGGCAGTGCTACTTTCAGACATTTATATGGTGGGGTTGCATTTCAGTCATAGGATTGGTTTCAAGCTTCTTGCTTTTCATGAGGACTAGAAAGGCTTACGACAATTTTGAAAAAATTGAAAATAGGAATAGAATGTAA 1689 0.4139 MVWESRKWVILLASIWIQAFTGTNFDFSSYSSDLKSVLDITQLQLNYLSVASDMGKAFGWCSGISLMYFPLWVVMFMAAFMGLVGYGLQWLVIMRLITLPYFVVFFLCLIAGCSICWFNTICYVLCVKHFAANRSLALSLSISFNGVSAALYTLLANAINSSDDTLYLLLNAIVPVLISLLVLFPILHQPQPQPHSADTLQRDSLVFLCLNILAIVTGLYLLFLYSFSSNSATMARVILAGAIFLLVLLLFLPGIVYSREWSCLTFPTSFSLYNSRFNVIDPDDHDHDLHKELIGDEDNARNGNAQSIREKKCCFVNVLEREQITTLGEEHSIRLLMRRWDFWLYYIAYFCGGTIGLVYSNNLGQISQSLGHSSQTSSIVTLYSTFSFFGRLLAAAPDFLSGKIHFARTGWFAAALVPTPIAFILLAISGSETALHIGTSLIGLSSGFVFSAAVSITLELFGPNSVGVNHNILITNIPLGSCLYGLLAALIYDSNATMNPTKHTTTTWLREMSMCMGRQCYFQTFIWWGCISVIGLVSSFLLFMRTRKAYDNFEKIENRNRM 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi556g00005 562 Gene3D MFS general substrate transporter like domains 335 558 IPR036259 -
Gabi556g00005 562 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 551 - -
Gabi556g00005 562 SUPERFAMILY MFS general substrate transporter 6 194 IPR036259 -
Gabi556g00005 562 Pfam Nodulin-like 7 253 IPR010658 -
Gabi556g00005 562 SUPERFAMILY MFS general substrate transporter 204 548 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi556g00005 Gabi-Chr556 10517 18896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi556g00005 6 555 Nodulin-like Gene Family AT1G31470 54.891 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi556g00005 - - gmx:100804951 890.567