Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi552g00002 ATGTCAGCATTAAGGGGGCGTTTCTTTCGGGAGATTCATCAAGTTATCTGGGGAAGTGATTCCTGCATTTTCAAAACTCCACGTTTGGATCTCGAAGACGAGATTGAAAGATGGATTAAGGCTTCCAACATCTCTCTCAAGATACTGTTCCCCAGCGAGCGGCGACTCTGCGACCGCGTATTCTTCGGGTTCTCTTCTGCTGCTGACTTCTCTTTCATGGAGGTTTGCAGGGGATCGACAATTCAGTTGCTGAATTTTGCCGATACCGTCGCGATTGGGAGCCATTCGCCGGAGCAATTGTTCAAAATCCTTGATGTGTTCGAGACATTGCGTGACTTAATTCCTGAGTTTGAGTCTCTGTTTTGTGATCAGTACAGTGTGTCGTTCAGGAACGAAGCAATCACAATTTGGAAGAGGTTGGGGGAAGCAATCAGAGGAATTTTCATGGACTTGGAGAATCTGATTCGCCGTGATCCGGCAAAGTCGGCGGTTCCCGGTGGTGGACTTCATCCAATTACTCGCTACGTGATGAACTACCTTCGTGCCGCTTGCCGGTCACGGCAGGCCCTGGAGCAAGTGTTTGAAGACTATGGGTTTCCGTTGAGAGAATACCCCAAGCTTGATGAAGTTCCGTCCTCTTCTTCTCTGTCAGTGCAAATGGATTGGATAATGGAGCTTATGGAGAGCAATTTGGAAGCAAAATCCAGAATCTACAAAGACCCTGCTTTGTGCTATGTTTTCTTCATGAATAACGACAGGTACATAGTTCAGAAGACCAAAGATGGTGAATTGGGAACACTTTTGGGTGATGATTGGATCCGAAAACACACTGCAAAAGTTCGGCAATAA 849 0.4664 MSALRGRFFREIHQVIWGSDSCIFKTPRLDLEDEIERWIKASNISLKILFPSERRLCDRVFFGFSSAADFSFMEVCRGSTIQLLNFADTVAIGSHSPEQLFKILDVFETLRDLIPEFESLFCDQYSVSFRNEAITIWKRLGEAIRGIFMDLENLIRRDPAKSAVPGGGLHPITRYVMNYLRAACRSRQALEQVFEDYGFPLREYPKLDEVPSSSSLSVQMDWIMELMESNLEAKSRIYKDPALCYVFFMNNDRYIVQKTKDGELGTLLGDDWIRKHTAKVRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi552g00002 282 Gene3D Exocyst complex component Exo70 17 282 - -
Gabi552g00002 282 Pfam Exo70 exocyst complex subunit 36 282 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi552g00002 282 SUPERFAMILY Cullin repeat-like 24 282 IPR016159 -
Gabi552g00002 282 Coils Coil 282 282 - -
Gabi552g00002 282 PANTHER EXOCYST COMPLEX PROTEIN EXO70 28 282 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi552g00002 Gabi-Chr552 84285 85319 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi552g00002 23 282 EXO70 exocyst subunit family AT5G58430 76.245 2.07e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi552g00002 K07195 - gmx:100803694 448.358