Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi54g00010 ATGGAGACCATTTCTTCTAATCACCTTATCACATCCCTTGTTATAATTCTTGTCTCTAGTTTCACCACACACTCCTCCCAAGTCATTGAAGGTAGCACAGTGTTCATTAGAACTTCATGTAGCTCCACAACTTACCCAAGACTCTGCTTTAGCTCACTAGTAAAGCATGCAGAGTTAATTCAAACAAATCGGGTGCTATTAACGGGAACAGCCCTCAACGTGACTCTTGTATCTGCTAAATCAACCTCAGATATGATGTCAACGCTCTCAAAGAGCCATGGGCTGAAGCCAAGAGAGGTTGCGGCAATGAAGGACTGTGTGGAAGAGCTGAGTGATTCTGTGGATGAACTTCGAAGGTCAATTTATGAAATGGGTCATCTTAGGAATTCAAATTTTGAGCTAACAATGAGTGACGTACAAACTTGGGTTAGTGCTGCTTTGACTGATGAGAGCACGTGCACCGATGGATTCCAAGATATTGCTTCTACGGATGATGATGGGGATATTAAGAGCACAGTGAGAGGTCGAATTGTGCAGGTAGCCCAATTGACTAGCAATGCTTTGGCTTTGATAAATCAGCTAGCTAATTCCCATGGCTAA 600 0.43 METISSNHLITSLVIILVSSFTTHSSQVIEGSTVFIRTSCSSTTYPRLCFSSLVKHAELIQTNRVLLTGTALNVTLVSAKSTSDMMSTLSKSHGLKPREVAAMKDCVEELSDSVDELRRSIYEMGHLRNSNFELTMSDVQTWVSAALTDESTCTDGFQDIASTDDDGDIKSTVRGRIVQVAQLTSNALALINQLANSHG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi54g00010 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 194 IPR035513 -
Gabi54g00010 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 190 - -
Gabi54g00010 199 NCBIfam pectinesterase inhibitor domain 7 194 IPR006501 GO:0004857
Gabi54g00010 199 CDD PMEI-like_3 38 196 - -
Gabi54g00010 199 SMART PMEI_2 31 190 IPR006501 GO:0004857
Gabi54g00010 199 FunFam Pectin methylesterase inhibitor 1 31 194 - -
Gabi54g00010 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 196 IPR035513 -
Gabi54g00010 199 Pfam Plant invertase/pectin methylesterase inhibitor 35 190 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi54g00010 Gabi-Chr54 103091 103690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi54g00010 36 197 Carbohydrate Esterase AT3G14310 32.738 2.25e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi54g00010 - - gmx:100305537 285.804