Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi54g00009 ATGGCATTATTGCACATTCTAGTTGGAAGTTCAATGTCTTCCCATAATCTCTTCAGAATGCTTCTATCCCTTTTATTCATCTCAACCCTTCTTCATGCAGCAGCAGCAGCAGCAGCATCTGCATCCAAGTCCACAACAAACGCAAACCAAATGTTCATAAAAAAACAGTGCGATTCAACCACTTACCCAAAAGTTTGCTACAAGTCTCTCTCCCCTTACGCTTCAAAAATCAACACAAACTCTCTAACACTGACCAAGATGTCAGTTAATGTGGCTCTAAAAGCAGCCAAAAGTGCATCTAAGACATTGACAAAGCTAAGCAATTCCAAAGGGAGCCTAACACATGCAGAAACGTCGGTCATTGCGGATTGCCAAGAGAATATTGATGACACGGTGGATATACTTAAGGAATCTGCTAAAGGGTTGTTACATTTGAGTGGTACAACTACAAGTGATGAGAAATTTCAATGGGATACCATTAAGACATGGATGAGTGCTGCCATAACAGATGAGGTTACTTGCACTGATGAGCTTGATGAATTGAAAGTGCGACCTTCACTGCAGAACAAGATCAAAACAAGTGTTTCTAATGTTGCTTCCTTGACTAGCAATGCCCTCGCTTTTGTCAACAGGCTTACCTATTAA 645 0.4093 MALLHILVGSSMSSHNLFRMLLSLLFISTLLHAAAAAAASASKSTTNANQMFIKKQCDSTTYPKVCYKSLSPYASKINTNSLTLTKMSVNVALKAAKSASKTLTKLSNSKGSLTHAETSVIADCQENIDDTVDILKESAKGLLHLSGTTTSDEKFQWDTIKTWMSAAITDEVTCTDELDELKVRPSLQNKIKTSVSNVASLTSNALAFVNRLTY 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi54g00009 214 NCBIfam pectinesterase inhibitor domain 24 212 IPR006501 GO:0004857
Gabi54g00009 214 CDD PMEI-like_3 57 213 - -
Gabi54g00009 214 SMART PMEI_2 48 208 IPR006501 GO:0004857
Gabi54g00009 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 213 IPR035513 -
Gabi54g00009 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 23 208 - -
Gabi54g00009 214 Pfam Plant invertase/pectin methylesterase inhibitor 52 207 IPR006501 GO:0004857
Gabi54g00009 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 212 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi54g00009 Gabi-Chr54 100553 101197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi54g00009 33 213 Carbohydrate Esterase AT3G14310 27.624 4.60e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi54g00009 - - gmx:100776299 261.922