Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi549g00001 CATTCACGGTTTGCTTTGCTTGTTCATCTTGTGGATGTGGTAGAGGTTTCACCCGTTTTGGATGGTGGTAGTTCTTCTTCTTTTTCTTCTGCAGATGGTTGCAATGAACGTGGGCTCATTAGACCACTGCCTCCTCTGATTGAATTGGGGGTATGGGACCTTCCATTTGGTCTATGTGTTGATGCATTTTATGAGGAAGCTCGGTGGGAAGGTGTTATATTTGATCACTGCAATGGAATGGAAGAAAGGAGCATATTCTTCCCAGATTTGGGTGATGAACTGAAGATTGGAATTGATCAATTGAGGATCACTCAAGATTGGAATGAAGCTACTGAGAATTGGGAGCCACGAAGGAAGTGGATGTTTCTTGAAGTGATTGAGGAGTGTGAGCAGTTTTCCTATATTGCAGTTTCATTTAAGCAAATTTGGTATGATTTAAGGAATAGTAACGAATTTGATAAAATAAGGGACTGGACTTGTAATGTGAAAGACTTGTGGAGAGACCTTGTAAGGGAGATAGTTGGTGATTACTTTACTCTCACGCTAGAAGAAGTTTACAAAGTCTTGGACTTTTCAGGTGCTTTCTTGAAAGAAACACCAGAGCTGGAGTCAGTTGAACATACTGATATTGTTCATTGTGATTCTAGTCCTAGTAATGTACTTGGTTCTAAAATTGGAATATCTGATTGCCCAATGGAAAGTGGTGACTCTACGAACTTGCTAGATACCGATCAAAACGGTGGTGGCATCGTTTTCATTCAAGAGAAATATGATACAAATCCTTTGGTCGATGGTGCATCTGAGAAAGAAATTGTGTTGGTAGAAGAACCTGAGTCTCAAAAGGAAATTTCCTGCTATGATGCTGGTGAAGTAATTTCAGATTCTAGCTATAATGAAAGAAGTGAAAAACGTAGACGTCCTACGTCTATATATTGGCAACCTCTGGTGCTATCTGAAGTTGAATTTTGTCCTGATGTTATTAATCAATATGGAGCTGGATGTGAGAGCAAGATGACCAGGGAAGGTTTGAAGACAAAAGCAAGAAAACATCTAGCATATCTTGGATGGAGAATTGAGTGGACTCAACACAAAAATTGTCCTGGGCAAAGACGATACAGGTACATGTCACCAAATAAACAGGACAAGAAGGTTTACTATTCAATTCCTCAAGTTTGTAGTCATCTGAAAAAAGAGTCCAACATGAATTTTGTGCTGTCCCAAAATGACCAGAGTAGGATGCATTCTACAGTTGACAATAATCTTTCAAATCTAGATGTTCATCATCCGATCGGGGCATCCTCTCCTGTCGAAGTTGTAGCTGAATCACATACTCCAGATGGTTTACCAATTGGGAATACAAATCATAAACGCACCACGAAATCAAAGGCCTGCCCACCAAAGCACAAGAGGAATGGATTACCTACAAGGGTGCAGAACGTAAATTCCCCTTGTCTATCACATCAAAATGTTTTGTCTTGGTTAATAGATAGCAACATGGTATTGCCAAGATCTAAGGTCTACTATCGGGGAAAAGGAGGCAAGAACACTCACGACATTGAAGGGGGGGTAACTCTTGATGGAATCAAGTGTAGCTGTTGTCAGAATGTATATAGACCTGGTGGCTTTGCAATTCATGCTAGTGGCTGTTATGACTGCAAGCCTTGTGCTAGTATCTTTTTGAGGGATGAATTGGGATGTTGTGATGTTGGTGGTACTAAAATTGACTTGTTGGCAGAGAGTTACAGCAAACTCAATGCTGCACTTTCAGTGATGCATGAATGTTTCGAGCCCTTGAAGAACCCTTACTCTAACAAAGATCTCATGGATGACGTTATATTCGGTAGAAGGTCGGAGCTTAATAGATCAAATTTCCAGGGTTTCTATGTTGTAATTATGGAGAGAAATGAAGAATTGGTTAGTGTGGCAACTGTTAGGATATTTGGACGAAAGGTAGCAGAAGTACCTCTCGTAGCTACCAGATTTATGTATCGTGGACTTGGAATGTGTCGTATTTTAATGGATGAGCTTGAAAAGAACCTCATGCGACTAGGAGTGGAGAGGATAGTTTTGCCTGTTGTTCCTAATATGCTTGAAACATGGACCAAATCTTTTAAGTTCGTGAAGATGACAAGTTTTGAGAGATCACAGTTTTTGGATTACGCTTTCCTAGATTTTCCAGGAACTGTCATGTGTCAGAAGCTGTTGACAACTCTTCCATCCCAGATTTGA 2229 0.4029 HSRFALLVHLVDVVEVSPVLDGGSSSSFSSADGCNERGLIRPLPPLIELGVWDLPFGLCVDAFYEEARWEGVIFDHCNGMEERSIFFPDLGDELKIGIDQLRITQDWNEATENWEPRRKWMFLEVIEECEQFSYIAVSFKQIWYDLRNSNEFDKIRDWTCNVKDLWRDLVREIVGDYFTLTLEEVYKVLDFSGAFLKETPELESVEHTDIVHCDSSPSNVLGSKIGISDCPMESGDSTNLLDTDQNGGGIVFIQEKYDTNPLVDGASEKEIVLVEEPESQKEISCYDAGEVISDSSYNERSEKRRRPTSIYWQPLVLSEVEFCPDVINQYGAGCESKMTREGLKTKARKHLAYLGWRIEWTQHKNCPGQRRYRYMSPNKQDKKVYYSIPQVCSHLKKESNMNFVLSQNDQSRMHSTVDNNLSNLDVHHPIGASSPVEVVAESHTPDGLPIGNTNHKRTTKSKACPPKHKRNGLPTRVQNVNSPCLSHQNVLSWLIDSNMVLPRSKVYYRGKGGKNTHDIEGGVTLDGIKCSCCQNVYRPGGFAIHASGCYDCKPCASIFLRDELGCCDVGGTKIDLLAESYSKLNAALSVMHECFEPLKNPYSNKDLMDDVIFGRRSELNRSNFQGFYVVIMERNEELVSVATVRIFGRKVAEVPLVATRFMYRGLGMCRILMDELEKNLMRLGVERIVLPVVPNMLETWTKSFKFVKMTSFERSQFLDYAFLDFPGTVMCQKLLTTLPSQI 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi549g00001 742 CDD NAT_SF 629 690 - -
Gabi549g00001 742 PANTHER PHD FINGER PROTEIN 12 337 563 IPR042163 GO:0003714|GO:0045892
Gabi549g00001 742 Pfam Acetyltransferase (GNAT) family 606 695 IPR000182 GO:0016747
Gabi549g00001 742 Pfam Tify domain binding domain 521 562 IPR032308 -
Gabi549g00001 742 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 574 735 IPR000182 GO:0016747
Gabi549g00001 742 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 584 697 IPR016181 -
Gabi549g00001 742 Gene3D - 580 718 - -
Gabi549g00001 742 MobiDBLite consensus disorder prediction 445 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi549g00001 Gabi-Chr549 7154 10812 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi549g00001 571 678 PHD Transcription Factor Family AT5G58610 58.333 1.44e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi549g00001 - - vra:106763506 566.229