Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi546g00001 ATGTCCAATCTAACTTCTTCAACCATTGATCCCTACAAGCATTTCAAAATCTTCTACAACCCCGATGGCACACTCACACGCATGCTTCCTGATCTACGCACCTTACCCTCATCAGATACCACTCTTCCTATCTCTGTTCTCACCAAAGATGTCACCATCAACGAAATAAATAACACTTGGGTTCGATTATTCCTACCCCGAAAAGCAATACCGGTTCATGGTTATTCCACTTCCAACCAAAACCACAAGCTACCTCTCATTGTTTTCTTCCATGGTGGCGGCTTCATCTTAGGGAGTGCTGCTTCCACCGTGTTCCATGATTTTTGCGTCAACATGGCAGATAGCATTGAAGCAGTTGTTGCATCGGTGGAATACCGCCTTGCGCCGGAGCATCGGTTGCCGGTGGCGTATGATGATGCCGTGGAAGCGGTGCTTTTCATTAGAAGCAGCCAAGATGAGTGGTTGACTCAATATGTTGACTATTCTAATTGTTATTTGATGGGGAATAGTGCTGGCGCTACTATTGTCTACCATGCAGGTCTACGTGCAGCACAAAAGGTTGGTGATCTTGAACCACTGAAGATCAAAGGGTTGATATTGCGTCAACCAAGCTTTGGTGGAACCAAGAGGACTGAATCCGAGTTGAGGCTTGAGAATGATCCTATGATTCCATTGTGTGTTGGCGATATGTTGTGGGAGCTAGCATTGCCAATTGGGGTTGACCGCGATCATGAGTATTCCAATCCAACGGTTGGGGATGGTCCTAAAAAACTGGATAAGATCAAGGAGCTTGGGTGGAAGGTATTGGTGAGTGGGAATGGTGGAGACCCACTTGCAGACCGTGGGAAAGAACTTGTGCAGTTAATGGAGGAAAAGGGTATTCAAGTGGTTAGTAACTTTGAGGAAGAGGGTCGCCATGCGGTAGAGCTATATGACCCAATTAAAGCAAAACTACTATTTGGAGTAGTTAAAGGTTTCATTTCCTCAATTTCTGCTTAG 999 0.4555 MSNLTSSTIDPYKHFKIFYNPDGTLTRMLPDLRTLPSSDTTLPISVLTKDVTINEINNTWVRLFLPRKAIPVHGYSTSNQNHKLPLIVFFHGGGFILGSAASTVFHDFCVNMADSIEAVVASVEYRLAPEHRLPVAYDDAVEAVLFIRSSQDEWLTQYVDYSNCYLMGNSAGATIVYHAGLRAAQKVGDLEPLKIKGLILRQPSFGGTKRTESELRLENDPMIPLCVGDMLWELALPIGVDRDHEYSNPTVGDGPKKLDKIKELGWKVLVSGNGGDPLADRGKELVQLMEEKGIQVVSNFEEEGRHAVELYDPIKAKLLFGVVKGFISSISA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi546g00001 332 Gene3D alpha/beta hydrolase 12 331 IPR029058 -
Gabi546g00001 332 Pfam alpha/beta hydrolase fold 87 308 IPR013094 GO:0016787
Gabi546g00001 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 IPR002168 GO:0016787
Gabi546g00001 332 PANTHER ARYLACETAMIDE DEACETYLASE 27 306 - -
Gabi546g00001 332 SUPERFAMILY alpha/beta-Hydrolases 33 314 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi546g00001 Gabi-Chr546 52486 53484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi546g00001 57 312 Carbohydrate Esterase AT5G16080 36.226 1.52e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi546g00001 - - gmx:100795069 441.039