LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi545g00004	ATGGCCGATAAGCAACCCCAGTTGAACGGTGCCTATTACGGGCCTGCCATTCCACCGGCGGAGCAACACCGATACCGTCATCACCGCGGCAGAAGCTGTTGTTGCTGCCTCTTCGGCTTCTTCTGGAAGCTTCTCATTGCCCTCATCGTCCTCGCTGGCCTAGCAATCCTCATCTTCTGGCTGGTCGTTCAACCACGTTCTTTCAAGTTCTACGTCACTGAAGCCAAGCTAACCCAATTTGACTACTCCAACAACACCCTACGTTACAACATGGTGCTCAACTTCACCGCCCGCAACCCCAACAAAAAGCTCAGCATTTACTACGACAAAGTGGAGGCCCTGGCATTCTACGAGGGATCTAGGTTTGCTAATTCCGATGTGATCACGCACATGAATTCATTCCGCCAGTACAAGAAGAGCACGAACCCCATGAGTGCTGTTTTCTCAGGTCAGCCATTGTTGCTGCTTGACAATGATCAGGTATCTGATTTCAACCAAGACAAGAGTGCTGGCGTTTATGACATCTATGTCAAACTCTACTTCAGGATTAGGTTCAGGCTCGGCGACGTGATAACTGGAACCAAGAAGCCCAAAGCCAAATGTGAGCTCAAGGTTCCATTAAGTTCTAATTCCGCCACAATCCTCACTCCCTTTGAGCCCGTCAAGTGTGATGTTGATTTCTAG	684	0.4956	MADKQPQLNGAYYGPAIPPAEQHRYRHHRGRSCCCCLFGFFWKLLIALIVLAGLAILIFWLVVQPRSFKFYVTEAKLTQFDYSNNTLRYNMVLNFTARNPNKKLSIYYDKVEALAFYEGSRFANSDVITHMNSFRQYKKSTNPMSAVFSGQPLLLLDNDQVSDFNQDKSAGVYDIYVKLYFRIRFRLGDVITGTKKPKAKCELKVPLSSNSATILTPFEPVKCDVDF	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi545g00004	227	PANTHER	OS05G0367900 PROTEIN	32	210	IPR044839	GO:0098542
	Gabi545g00004	227	Pfam	Late embryogenesis abundant protein	95	201	IPR004864	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi545g00004	Gabi-Chr545	40981	41805	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi545g00004	62	212	SNARE and Associated Proteins	AT1G32270	37.419	7.81e-23	92.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi545g00004	-		-	gmx:100807701	362.844