Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi545g00002 ATGTATGAGAAACAACCCCAGTTGAACGGAGCCTACTACGGCCCCTCCATCCCGCCACAAAAATCATACCACCGCCCAAGTCGTGGCGGCGGCTGCGACTGCTGCTGCGGCTGCATCTTCAACCTCATCTTCAAACTCATCCTCACCGTCGTCTTCATCGTGGGAATAGCGGTCTTCCTCTTCTGGCTCATCGTCCGTCCCAACGTGGTGAAGGTTCACGTCACCGATGCTTCGCTCAGCCAATTCAACTACACCGGGGACACCCTCAACTACGACCTTGCTCTCAACATCACCGTACGCAACCCCAACAAGAGGCTCGGTATTTACTACGACTACATCGAAGCGCGTGCATTGTTCCAGGACGCAAGGTTCGACTCGGATTTCCTTGACCCGTTCTATCAGGGGCACAAAACCACCAACGTGTTAAACCCTGTCTTCAAGGGTCAGCAGGTCATAGCCCTCAACGCTGACCAGACTTCAGAACTAAACAAGGAAAAAAACTCGGGGGTTTACGTTATCGATGTGAAGCTGTATCTGAGGGTTAGATTCAAGTTGGGTGTGTTTAAGACCAAGACGCTGAAACCTAAGATTAGCTGTGACTTGCAAATTCCTTCATCGCCTGCCGCCGGTATCTTTCAGACCACCAAGTGCGACTGGGATCGCTGA 666 0.521 MYEKQPQLNGAYYGPSIPPQKSYHRPSRGGGCDCCCGCIFNLIFKLILTVVFIVGIAVFLFWLIVRPNVVKVHVTDASLSQFNYTGDTLNYDLALNITVRNPNKRLGIYYDYIEARALFQDARFDSDFLDPFYQGHKTTNVLNPVFKGQQVIALNADQTSELNKEKNSGVYVIDVKLYLRVRFKLGVFKTKTLKPKISCDLQIPSSPAAGIFQTTKCDWDR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi545g00002 221 PANTHER OS05G0367900 PROTEIN 33 204 IPR044839 GO:0098542
Gabi545g00002 221 Pfam Late embryogenesis abundant protein 96 199 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi545g00002 Gabi-Chr545 34341 35419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi545g00002 64 204 SNARE and Associated Proteins AT1G32270 35.211 2.43e-23 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi545g00002 - - gmx:100793187 355.14